Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01554Q52M75 HES6-203ENST00000409160 1600 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01554Q52M75 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01554Q52M75 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01554Q52M75 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01554Q52M75 AC135731.1-201ENST00000569415 2548 ntBASIC14.6□□□□□ -0.07
LINC01554Q52M75 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01554Q52M75 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01554Q52M75 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01554Q52M75 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LINC01554Q52M75 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC01554Q52M75 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC01554Q52M75 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC01554Q52M75 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01554Q52M75 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC01554Q52M75 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01554Q52M75 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC01554Q52M75 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01554Q52M75 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01554Q52M75 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01554Q52M75 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01554Q52M75 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01554Q52M75 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01554Q52M75 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01554Q52M75 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01554Q52M75 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01554Q52M75 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC01554Q52M75 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC01554Q52M75 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LINC01554Q52M75 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC01554Q52M75 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01554Q52M75 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC01554Q52M75 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01554Q52M75 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01554Q52M75 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LINC01554Q52M75 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01554Q52M75 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01554Q52M75 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01554Q52M75 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01554Q52M75 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01554Q52M75 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01554Q52M75 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01554Q52M75 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01554Q52M75 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01554Q52M75 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01554Q52M75 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01554Q52M75 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01554Q52M75 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01554Q52M75 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01554Q52M75 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC01554Q52M75 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
LINC01554Q52M75 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC01554Q52M75 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01554Q52M75 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01554Q52M75 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01554Q52M75 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01554Q52M75 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01554Q52M75 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01554Q52M75 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01554Q52M75 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01554Q52M75 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01554Q52M75 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01554Q52M75 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01554Q52M75 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01554Q52M75 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01554Q52M75 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC01554Q52M75 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01554Q52M75 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01554Q52M75 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01554Q52M75 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LINC01554Q52M75 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01554Q52M75 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC01554Q52M75 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01554Q52M75 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01554Q52M75 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01554Q52M75 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC01554Q52M75 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01554Q52M75 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01554Q52M75 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01554Q52M75 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC01554Q52M75 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01554Q52M75 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC01554Q52M75 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC01554Q52M75 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LINC01554Q52M75 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LINC01554Q52M75 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01554Q52M75 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01554Q52M75 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01554Q52M75 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01554Q52M75 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01554Q52M75 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01554Q52M75 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01554Q52M75 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01554Q52M75 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01554Q52M75 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01554Q52M75 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01554Q52M75 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01554Q52M75 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC01554Q52M75 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01554Q52M75 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms