Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.95■■■□□ 2.87
TRIM60Q495X7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
TRIM60Q495X7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.89■■■□□ 2.86
TRIM60Q495X7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.88■■■□□ 2.85
TRIM60Q495X7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.87■■■□□ 2.85
TRIM60Q495X7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.82■■■□□ 2.84
TRIM60Q495X7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.82■■■□□ 2.84
TRIM60Q495X7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.8■■■□□ 2.84
TRIM60Q495X7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
TRIM60Q495X7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
TRIM60Q495X7 RARRES2P7-201ENST00000567349 469 ntBASIC32.78■■■□□ 2.84
TRIM60Q495X7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
TRIM60Q495X7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
TRIM60Q495X7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.74■■■□□ 2.83
TRIM60Q495X7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TRIM60Q495X7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
TRIM60Q495X7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
TRIM60Q495X7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
TRIM60Q495X7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.6■■■□□ 2.81
TRIM60Q495X7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.59■■■□□ 2.81
TRIM60Q495X7 AC097358.2-201ENST00000607541 1159 ntBASIC32.57■■■□□ 2.8
TRIM60Q495X7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.53■■■□□ 2.8
TRIM60Q495X7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.49■■■□□ 2.79
TRIM60Q495X7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TRIM60Q495X7 AC136428.2-201ENST00000563187 214 ntBASIC32.46■■■□□ 2.79
TRIM60Q495X7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.42■■■□□ 2.78
TRIM60Q495X7 SETD8P1-201ENST00000623146 1180 ntBASIC32.42■■■□□ 2.78
TRIM60Q495X7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.42■■■□□ 2.78
TRIM60Q495X7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.41■■■□□ 2.78
TRIM60Q495X7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
TRIM60Q495X7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRIM60Q495X7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRIM60Q495X7 RPS2P35-201ENST00000443417 897 ntBASIC32.39■■■□□ 2.78
TRIM60Q495X7 SUZ12P1-203ENST00000578195 985 ntBASIC32.38■■■□□ 2.77
TRIM60Q495X7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
TRIM60Q495X7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.32■■■□□ 2.76
TRIM60Q495X7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.28■■■□□ 2.76
TRIM60Q495X7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
TRIM60Q495X7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.27■■■□□ 2.76
TRIM60Q495X7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.25■■■□□ 2.75
TRIM60Q495X7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRIM60Q495X7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
TRIM60Q495X7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.22■■■□□ 2.75
TRIM60Q495X7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.22■■■□□ 2.75
TRIM60Q495X7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
TRIM60Q495X7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TRIM60Q495X7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TRIM60Q495X7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
TRIM60Q495X7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.18■■■□□ 2.74
TRIM60Q495X7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
TRIM60Q495X7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
TRIM60Q495X7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TRIM60Q495X7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.11■■■□□ 2.73
TRIM60Q495X7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TRIM60Q495X7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TRIM60Q495X7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.08■■■□□ 2.73
TRIM60Q495X7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TRIM60Q495X7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.05■■■□□ 2.72
TRIM60Q495X7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
TRIM60Q495X7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.02■■■□□ 2.72
TRIM60Q495X7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
TRIM60Q495X7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM60Q495X7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM60Q495X7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM60Q495X7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM60Q495X7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM60Q495X7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.85■■■□□ 2.69
TRIM60Q495X7 AL162393.1-201ENST00000437852 946 ntBASIC31.84■■■□□ 2.69
TRIM60Q495X7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
TRIM60Q495X7 CAHM-201ENST00000604200 896 ntBASIC31.83■■■□□ 2.69
TRIM60Q495X7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
TRIM60Q495X7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM60Q495X7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM60Q495X7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
TRIM60Q495X7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.76■■■□□ 2.67
TRIM60Q495X7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
TRIM60Q495X7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM60Q495X7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TRIM60Q495X7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.72■■■□□ 2.67
TRIM60Q495X7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.72■■■□□ 2.67
TRIM60Q495X7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM60Q495X7 AP006261.1-201ENST00000584783 668 ntBASIC31.69■■■□□ 2.66
TRIM60Q495X7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.67■■■□□ 2.66
TRIM60Q495X7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
TRIM60Q495X7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.66■■■□□ 2.66
TRIM60Q495X7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM60Q495X7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM60Q495X7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.64■■■□□ 2.66
TRIM60Q495X7 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.64■■■□□ 2.66
TRIM60Q495X7 AL391121.1-201ENST00000607967 1349 ntBASIC31.63■■■□□ 2.65
TRIM60Q495X7 AC145285.7-201ENST00000614819 1539 ntBASIC31.63■■■□□ 2.65
TRIM60Q495X7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.6■■■□□ 2.65
TRIM60Q495X7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM60Q495X7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM60Q495X7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.59■■■□□ 2.65
TRIM60Q495X7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM60Q495X7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
TRIM60Q495X7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TRIM60Q495X7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
TRIM60Q495X7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms