Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC38.37■■■■□ 3.73
KCNQ4P56696 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
KCNQ4P56696 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
KCNQ4P56696 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC38.32■■■■□ 3.72
KCNQ4P56696 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC38.3■■■■□ 3.72
KCNQ4P56696 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
KCNQ4P56696 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.3■■■■□ 3.72
KCNQ4P56696 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC38.29■■■■□ 3.72
KCNQ4P56696 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.25■■■■□ 3.71
KCNQ4P56696 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC38.23■■■■□ 3.71
KCNQ4P56696 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.22■■■■□ 3.71
KCNQ4P56696 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
KCNQ4P56696 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC38.19■■■■□ 3.7
KCNQ4P56696 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
KCNQ4P56696 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC38.17■■■■□ 3.7
KCNQ4P56696 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC38.17■■■■□ 3.7
KCNQ4P56696 RARRES2P7-201ENST00000567349 469 ntBASIC38.16■■■■□ 3.7
KCNQ4P56696 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC38.01■■■■□ 3.67
KCNQ4P56696 AC097358.2-201ENST00000607541 1159 ntBASIC37.97■■■■□ 3.67
KCNQ4P56696 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
KCNQ4P56696 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
KCNQ4P56696 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.9■■■■□ 3.66
KCNQ4P56696 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.9■■■■□ 3.66
KCNQ4P56696 AC136428.2-201ENST00000563187 214 ntBASIC37.89■■■■□ 3.66
KCNQ4P56696 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
KCNQ4P56696 RPS2P35-201ENST00000443417 897 ntBASIC37.84■■■■□ 3.65
KCNQ4P56696 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.84■■■■□ 3.65
KCNQ4P56696 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.79■■■■□ 3.64
KCNQ4P56696 SUZ12P1-203ENST00000578195 985 ntBASIC37.79■■■■□ 3.64
KCNQ4P56696 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
KCNQ4P56696 SETD8P1-201ENST00000623146 1180 ntBASIC37.76■■■■□ 3.64
KCNQ4P56696 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.75■■■■□ 3.63
KCNQ4P56696 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
KCNQ4P56696 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC37.7■■■■□ 3.63
KCNQ4P56696 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
KCNQ4P56696 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.68■■■■□ 3.62
KCNQ4P56696 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC37.65■■■■□ 3.62
KCNQ4P56696 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC37.65■■■■□ 3.62
KCNQ4P56696 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC37.64■■■■□ 3.62
KCNQ4P56696 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC37.61■■■■□ 3.61
KCNQ4P56696 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
KCNQ4P56696 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC37.58■■■■□ 3.61
KCNQ4P56696 KLF16-203ENST00000592313 508 ntTSL 3 BASIC37.55■■■■□ 3.6
KCNQ4P56696 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC37.54■■■■□ 3.6
KCNQ4P56696 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
KCNQ4P56696 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.53■■■■□ 3.6
KCNQ4P56696 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
KCNQ4P56696 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC37.53■■■■□ 3.6
KCNQ4P56696 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
KCNQ4P56696 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC37.49■■■■□ 3.59
KCNQ4P56696 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37.47■■■■□ 3.59
KCNQ4P56696 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC37.47■■■■□ 3.59
KCNQ4P56696 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
KCNQ4P56696 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
KCNQ4P56696 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC37.36■■■■□ 3.57
KCNQ4P56696 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.34■■■■□ 3.57
KCNQ4P56696 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.33■■■■□ 3.57
KCNQ4P56696 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
KCNQ4P56696 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC37.29■■■■□ 3.56
KCNQ4P56696 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC37.25■■■■□ 3.55
KCNQ4P56696 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC37.23■■■■□ 3.55
KCNQ4P56696 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
KCNQ4P56696 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.22■■■■□ 3.55
KCNQ4P56696 CAHM-201ENST00000604200 896 ntBASIC37.19■■■■□ 3.54
KCNQ4P56696 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
KCNQ4P56696 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC37.15■■■■□ 3.54
KCNQ4P56696 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC37.13■■■■□ 3.54
KCNQ4P56696 AL162393.1-201ENST00000437852 946 ntBASIC37.13■■■■□ 3.53
KCNQ4P56696 NRG1-221ENST00000614767 762 ntTSL 5 BASIC37.11■■■■□ 3.53
KCNQ4P56696 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
KCNQ4P56696 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC37.08■■■■□ 3.53
KCNQ4P56696 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC37.04■■■■□ 3.52
KCNQ4P56696 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
KCNQ4P56696 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC37.03■■■■□ 3.52
KCNQ4P56696 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC37.02■■■■□ 3.52
KCNQ4P56696 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
KCNQ4P56696 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
KCNQ4P56696 AC145285.7-201ENST00000614819 1539 ntBASIC36.99■■■■□ 3.51
KCNQ4P56696 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
KCNQ4P56696 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.95■■■■□ 3.51
KCNQ4P56696 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
KCNQ4P56696 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.91■■■■□ 3.5
KCNQ4P56696 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.91■■■■□ 3.5
KCNQ4P56696 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
KCNQ4P56696 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
KCNQ4P56696 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.88■■■■□ 3.49
KCNQ4P56696 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
KCNQ4P56696 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
KCNQ4P56696 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.86■■■■□ 3.49
KCNQ4P56696 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.85■■■■□ 3.49
KCNQ4P56696 AL391121.1-201ENST00000607967 1349 ntBASIC36.85■■■■□ 3.49
KCNQ4P56696 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
KCNQ4P56696 AP006261.1-201ENST00000584783 668 ntBASIC36.78■■■■□ 3.48
KCNQ4P56696 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
KCNQ4P56696 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.77■■■■□ 3.48
KCNQ4P56696 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC36.75■■■■□ 3.47
KCNQ4P56696 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.75■■■■□ 3.47
KCNQ4P56696 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
KCNQ4P56696 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.74■■■■□ 3.47
KCNQ4P56696 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms