Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APOC4P55056 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
APOC4P55056 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APOC4P55056 DYNLL1-208ENST00000550178 581 ntBASIC21.25■□□□□ 0.99
APOC4P55056 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
APOC4P55056 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APOC4P55056 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
APOC4P55056 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
APOC4P55056 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APOC4P55056 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.15■□□□□ 0.98
APOC4P55056 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
APOC4P55056 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.12■□□□□ 0.97
APOC4P55056 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOC4P55056 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOC4P55056 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.1■□□□□ 0.97
APOC4P55056 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
APOC4P55056 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.08■□□□□ 0.97
APOC4P55056 AC145285.7-201ENST00000614819 1539 ntBASIC21.08■□□□□ 0.96
APOC4P55056 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
APOC4P55056 AL031258.1-201ENST00000623562 325 ntBASIC21.07■□□□□ 0.96
APOC4P55056 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
APOC4P55056 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.05■□□□□ 0.96
APOC4P55056 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
APOC4P55056 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC4P55056 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APOC4P55056 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APOC4P55056 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
APOC4P55056 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APOC4P55056 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APOC4P55056 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21■□□□□ 0.95
APOC4P55056 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21■□□□□ 0.95
APOC4P55056 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
APOC4P55056 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.98■□□□□ 0.95
APOC4P55056 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.96■□□□□ 0.95
APOC4P55056 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APOC4P55056 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.95■□□□□ 0.94
APOC4P55056 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.95■□□□□ 0.94
APOC4P55056 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APOC4P55056 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
APOC4P55056 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APOC4P55056 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
APOC4P55056 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.91■□□□□ 0.94
APOC4P55056 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.9■□□□□ 0.94
APOC4P55056 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
APOC4P55056 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
APOC4P55056 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.86■□□□□ 0.93
APOC4P55056 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.86■□□□□ 0.93
APOC4P55056 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APOC4P55056 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.83■□□□□ 0.93
APOC4P55056 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APOC4P55056 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APOC4P55056 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
APOC4P55056 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
APOC4P55056 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
APOC4P55056 RARRES2P7-201ENST00000567349 469 ntBASIC20.76■□□□□ 0.91
APOC4P55056 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APOC4P55056 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APOC4P55056 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
APOC4P55056 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC4P55056 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.7■□□□□ 0.9
APOC4P55056 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
APOC4P55056 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.69■□□□□ 0.9
APOC4P55056 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4P55056 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4P55056 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4P55056 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
APOC4P55056 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.66■□□□□ 0.9
APOC4P55056 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4P55056 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4P55056 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.63■□□□□ 0.89
APOC4P55056 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOC4P55056 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
APOC4P55056 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.62■□□□□ 0.89
APOC4P55056 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOC4P55056 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOC4P55056 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.6■□□□□ 0.89
APOC4P55056 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
APOC4P55056 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
APOC4P55056 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APOC4P55056 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
APOC4P55056 SETD8P1-201ENST00000623146 1180 ntBASIC20.57■□□□□ 0.88
APOC4P55056 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APOC4P55056 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APOC4P55056 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APOC4P55056 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APOC4P55056 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.53■□□□□ 0.88
APOC4P55056 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.51■□□□□ 0.87
APOC4P55056 AC097358.2-201ENST00000607541 1159 ntBASIC20.51■□□□□ 0.87
APOC4P55056 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APOC4P55056 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.5■□□□□ 0.87
APOC4P55056 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.5■□□□□ 0.87
APOC4P55056 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
APOC4P55056 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.49■□□□□ 0.87
APOC4P55056 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.48■□□□□ 0.87
APOC4P55056 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
APOC4P55056 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
APOC4P55056 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOC4P55056 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOC4P55056 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.46■□□□□ 0.87
APOC4P55056 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms