Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 YGR021WYGR021W 873 nt13.23□□□□□ -0.29
MVP1P40959 PCH2YBR186W 1695 nt13.22□□□□□ -0.29
MVP1P40959 SCC4YER147C 1875 nt13.21□□□□□ -0.29
MVP1P40959 IRC15YPL017C 1500 nt13.19□□□□□ -0.3
MVP1P40959 HOM6YJR139C 1080 nt13.18□□□□□ -0.3
MVP1P40959 GUT2YIL155C 1950 nt13.18□□□□□ -0.3
MVP1P40959 MNP1YGL068W 585 nt13.13□□□□□ -0.31
MVP1P40959 SEC11YIR022W 504 nt13.12□□□□□ -0.31
MVP1P40959 GIS3YLR094C 1509 nt13.11□□□□□ -0.31
MVP1P40959 YFL021C-AYFL021C-A 855 nt13.1□□□□□ -0.31
MVP1P40959 TRM9YML014W 840 nt13.09□□□□□ -0.31
MVP1P40959 LSM3YLR438C-A 270 nt13.07□□□□□ -0.32
MVP1P40959 PAM17YKR065C 594 nt13.04□□□□□ -0.32
MVP1P40959 SIS1YNL007C 1059 nt13.04□□□□□ -0.32
MVP1P40959 YOR139CYOR139C 393 nt13.03□□□□□ -0.32
MVP1P40959 REG2YBR050C 1017 nt13.02□□□□□ -0.33
MVP1P40959 YSC84YHR016C 1407 nt13.02□□□□□ -0.33
MVP1P40959 CCT6YDR188W 1641 nt13.02□□□□□ -0.33
MVP1P40959 RKM5YLR137W 1104 nt13□□□□□ -0.33
MVP1P40959 GFD2YCL036W 1701 nt12.99□□□□□ -0.33
MVP1P40959 RTS2YOR077W 699 nt12.99□□□□□ -0.33
MVP1P40959 PIB2YGL023C 1908 nt12.98□□□□□ -0.33
MVP1P40959 ART5YGR068C 1761 nt12.96□□□□□ -0.34
MVP1P40959 NVJ2YPR091C 2313 nt12.94□□□□□ -0.34
MVP1P40959 NPL3YDR432W 1245 nt12.93□□□□□ -0.34
MVP1P40959 SUF2tP(AGG)C 72 nt12.93□□□□□ -0.34
MVP1P40959 SUF10tP(AGG)N 72 nt12.93□□□□□ -0.34
MVP1P40959 YHL050CYHL050C 2094 nt12.91□□□□□ -0.34
MVP1P40959 YOL037CYOL037C 354 nt12.87□□□□□ -0.35
MVP1P40959 RTF1YGL244W 1677 nt12.84□□□□□ -0.35
MVP1P40959 RRT12YCR045C 1476 nt12.83□□□□□ -0.36
MVP1P40959 PET9YBL030C 957 nt12.78□□□□□ -0.36
MVP1P40959 CUE1YMR264W 612 nt12.77□□□□□ -0.37
MVP1P40959 BOP3YNL042W 1191 nt12.7□□□□□ -0.38
MVP1P40959 TIR4YOR009W 1464 nt12.7□□□□□ -0.38
MVP1P40959 PTK1YKL198C 1989 nt12.67□□□□□ -0.38
MVP1P40959 YNL195CYNL195C 786 nt12.66□□□□□ -0.38
MVP1P40959 BUR6YER159C 429 nt12.65□□□□□ -0.38
MVP1P40959 YCH1YGR203W 447 nt12.62□□□□□ -0.39
MVP1P40959 YIL100WYIL100W 354 nt12.61□□□□□ -0.39
MVP1P40959 YMR057CYMR057C 372 nt12.61□□□□□ -0.39
MVP1P40959 YLR281CYLR281C 468 nt12.6□□□□□ -0.39
MVP1P40959 Q0010Q0010 387 nt12.6□□□□□ -0.39
MVP1P40959 WHI5YOR083W 888 nt12.58□□□□□ -0.4
MVP1P40959 YLR154C-GYLR154C-G 150 nt12.56□□□□□ -0.4
MVP1P40959 MET8YBR213W 825 nt12.56□□□□□ -0.4
MVP1P40959 FPS1YLL043W 2010 nt12.55□□□□□ -0.4
MVP1P40959 tM(CAU)CtM(CAU)C 72 nt12.53□□□□□ -0.4
MVP1P40959 IMT4tM(CAU)E 72 nt12.53□□□□□ -0.4
MVP1P40959 IMT3tM(CAU)J3 72 nt12.53□□□□□ -0.4
MVP1P40959 IMT1tM(CAU)O1 72 nt12.53□□□□□ -0.4
MVP1P40959 IMT2tM(CAU)P 72 nt12.53□□□□□ -0.4
MVP1P40959 BMT5YIL096C 1011 nt12.53□□□□□ -0.4
MVP1P40959 ARA2YMR041C 1008 nt12.5□□□□□ -0.41
MVP1P40959 YEL009C-AYEL009C-A 408 nt12.49□□□□□ -0.41
MVP1P40959 PUS2YGL063W 1113 nt12.48□□□□□ -0.41
MVP1P40959 YJL152WYJL152W 360 nt12.48□□□□□ -0.41
MVP1P40959 NCP1YHR042W 2076 nt12.48□□□□□ -0.41
MVP1P40959 YLR236CYLR236C 324 nt12.46□□□□□ -0.41
MVP1P40959 CLB6YGR109C 1143 nt12.45□□□□□ -0.42
MVP1P40959 YFL054CYFL054C 1941 nt12.41□□□□□ -0.42
MVP1P40959 YDR509WYDR509W 348 nt12.39□□□□□ -0.43
MVP1P40959 YIR018C-AYIR018C-A 138 nt12.37□□□□□ -0.43
MVP1P40959 YLR122CYLR122C 378 nt12.36□□□□□ -0.43
MVP1P40959 SRN2YLR119W 642 nt12.34□□□□□ -0.43
MVP1P40959 SPT8YLR055C 1809 nt12.32□□□□□ -0.44
MVP1P40959 BOR1YNL275W 1731 nt12.31□□□□□ -0.44
MVP1P40959 DSK2YMR276W 1122 nt12.3□□□□□ -0.44
MVP1P40959 LCB1YMR296C 1677 nt12.29□□□□□ -0.44
MVP1P40959 YCL048W-AYCL048W-A 240 nt12.28□□□□□ -0.44
MVP1P40959 IMP2'YIL154C 1041 nt12.27□□□□□ -0.45
MVP1P40959 YPR011CYPR011C 981 nt12.27□□□□□ -0.45
MVP1P40959 IDH1YNL037C 1083 nt12.23□□□□□ -0.45
MVP1P40959 ABZ2YMR289W 1125 nt12.22□□□□□ -0.45
MVP1P40959 FMP45YDL222C 930 nt12.17□□□□□ -0.46
MVP1P40959 GBP2YCL011C 1284 nt12.14□□□□□ -0.47
MVP1P40959 SEM1YDR363W-A 270 nt12.12□□□□□ -0.47
MVP1P40959 TOM20YGR082W 552 nt12.11□□□□□ -0.47
MVP1P40959 SWE1YJL187C 2460 nt12.11□□□□□ -0.47
MVP1P40959 Q0144Q0144 330 nt12.1□□□□□ -0.47
MVP1P40959 YDR433WYDR433W 441 nt12.09□□□□□ -0.47
MVP1P40959 UME6YDR207C 2511 nt12.08□□□□□ -0.48
MVP1P40959 LPX1YOR084W 1164 nt12.06□□□□□ -0.48
MVP1P40959 HSP60YLR259C 1719 nt12.04□□□□□ -0.48
MVP1P40959 LCP5YER127W 1074 nt12.04□□□□□ -0.48
MVP1P40959 ERV46YAL042W 1248 nt12.03□□□□□ -0.48
MVP1P40959 RRD1YIL153W 1182 nt12.02□□□□□ -0.49
MVP1P40959 SIM1YIL123W 1431 nt12.02□□□□□ -0.49
MVP1P40959 LYS4YDR234W 2082 nt12.01□□□□□ -0.49
MVP1P40959 MXR2YCL033C 507 nt12□□□□□ -0.49
MVP1P40959 TCD2YKL027W 1344 nt12□□□□□ -0.49
MVP1P40959 ARP10YDR106W 855 nt11.99□□□□□ -0.49
MVP1P40959 URH1YDR400W 1023 nt11.99□□□□□ -0.49
MVP1P40959 YKR040CYKR040C 504 nt11.96□□□□□ -0.49
MVP1P40959 DED1YOR204W 1815 nt11.95□□□□□ -0.5
MVP1P40959 PCM1YEL058W 1674 nt11.94□□□□□ -0.5
MVP1P40959 FMP52YER004W 696 nt11.91□□□□□ -0.5
MVP1P40959 VAR1Q0140 1197 nt11.91□□□□□ -0.5
MVP1P40959 AI5_BETAQ0075 1065 nt11.9□□□□□ -0.5
MVP1P40959 MCH5YOR306C 1566 nt11.9□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 53.5 ms