Protein–RNA interactions for Protein: P32908

SMC1, Structural maintenance of chromosomes protein 1, yeastyeast

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMC1P32908 YDL221WYDL221W 552 nt13.25□□□□□ -0.29
SMC1P32908 YMR090WYMR090W 684 nt13.25□□□□□ -0.29
SMC1P32908 NPL3YDR432W 1245 nt13.24□□□□□ -0.29
SMC1P32908 ART5YGR068C 1761 nt13.21□□□□□ -0.29
SMC1P32908 YBR220CYBR220C 1683 nt13.18□□□□□ -0.3
SMC1P32908 GFD2YCL036W 1701 nt13.18□□□□□ -0.3
SMC1P32908 IRC15YPL017C 1500 nt13.16□□□□□ -0.3
SMC1P32908 PET9YBL030C 957 nt13.15□□□□□ -0.3
SMC1P32908 BDF1YLR399C 2061 nt13.15□□□□□ -0.3
SMC1P32908 TIR4YOR009W 1464 nt13.13□□□□□ -0.31
SMC1P32908 SDH1YKL148C 1923 nt13.12□□□□□ -0.31
SMC1P32908 YLR154C-GYLR154C-G 150 nt13.11□□□□□ -0.31
SMC1P32908 YCH1YGR203W 447 nt13.1□□□□□ -0.31
SMC1P32908 YLR281CYLR281C 468 nt13.05□□□□□ -0.32
SMC1P32908 GIS3YLR094C 1509 nt13.04□□□□□ -0.32
SMC1P32908 WHI5YOR083W 888 nt13.03□□□□□ -0.32
SMC1P32908 YMR057CYMR057C 372 nt13.02□□□□□ -0.33
SMC1P32908 SCC4YER147C 1875 nt13.02□□□□□ -0.33
SMC1P32908 RTS2YOR077W 699 nt13.01□□□□□ -0.33
SMC1P32908 YJL152WYJL152W 360 nt13□□□□□ -0.33
SMC1P32908 TAT1YBR069C 1860 nt12.97□□□□□ -0.33
SMC1P32908 CUE1YMR264W 612 nt12.92□□□□□ -0.34
SMC1P32908 FPS1YLL043W 2010 nt12.88□□□□□ -0.35
SMC1P32908 tM(CAU)CtM(CAU)C 72 nt12.88□□□□□ -0.35
SMC1P32908 IMT4tM(CAU)E 72 nt12.88□□□□□ -0.35
SMC1P32908 IMT3tM(CAU)J3 72 nt12.88□□□□□ -0.35
SMC1P32908 IMT1tM(CAU)O1 72 nt12.88□□□□□ -0.35
SMC1P32908 IMT2tM(CAU)P 72 nt12.88□□□□□ -0.35
SMC1P32908 PUS2YGL063W 1113 nt12.84□□□□□ -0.35
SMC1P32908 YCL048W-AYCL048W-A 240 nt12.8□□□□□ -0.36
SMC1P32908 IMP2'YIL154C 1041 nt12.74□□□□□ -0.37
SMC1P32908 YLR236CYLR236C 324 nt12.74□□□□□ -0.37
SMC1P32908 YIL100WYIL100W 354 nt12.73□□□□□ -0.37
SMC1P32908 IDH1YNL037C 1083 nt12.72□□□□□ -0.37
SMC1P32908 SEC11YIR022W 504 nt12.71□□□□□ -0.37
SMC1P32908 DSK2YMR276W 1122 nt12.71□□□□□ -0.37
SMC1P32908 YPR011CYPR011C 981 nt12.71□□□□□ -0.37
SMC1P32908 YSC84YHR016C 1407 nt12.71□□□□□ -0.38
SMC1P32908 YJL225CYJL225C 5277 nt12.67□□□□□ -0.38
SMC1P32908 RRT12YCR045C 1476 nt12.67□□□□□ -0.38
SMC1P32908 YHL050CYHL050C 2094 nt12.67□□□□□ -0.38
SMC1P32908 PCH2YBR186W 1695 nt12.67□□□□□ -0.38
SMC1P32908 GBP2YCL011C 1284 nt12.66□□□□□ -0.38
SMC1P32908 RRD1YIL153W 1182 nt12.61□□□□□ -0.39
SMC1P32908 YNL195CYNL195C 786 nt12.61□□□□□ -0.39
SMC1P32908 GUT2YIL155C 1950 nt12.6□□□□□ -0.39
SMC1P32908 DED1YOR204W 1815 nt12.55□□□□□ -0.4
SMC1P32908 FMP45YDL222C 930 nt12.55□□□□□ -0.4
SMC1P32908 TCD2YKL027W 1344 nt12.54□□□□□ -0.4
SMC1P32908 PAC11YDR488C 1602 nt12.54□□□□□ -0.4
SMC1P32908 NME1NME1 340 nt12.53□□□□□ -0.4
SMC1P32908 RDN37-1RDN37-1 5354 nt12.52□□□□□ -0.41
SMC1P32908 RDN37-2RDN37-2 5354 nt12.52□□□□□ -0.41
SMC1P32908 YDR433WYDR433W 441 nt12.51□□□□□ -0.41
SMC1P32908 ERV46YAL042W 1248 nt12.5□□□□□ -0.41
SMC1P32908 LPX1YOR084W 1164 nt12.48□□□□□ -0.41
SMC1P32908 MXR2YCL033C 507 nt12.48□□□□□ -0.41
SMC1P32908 FMT1YBL013W 1206 nt12.47□□□□□ -0.41
SMC1P32908 PIB2YGL023C 1908 nt12.45□□□□□ -0.42
SMC1P32908 FMP52YER004W 696 nt12.45□□□□□ -0.42
SMC1P32908 YKR040CYKR040C 504 nt12.44□□□□□ -0.42
SMC1P32908 RTF1YGL244W 1677 nt12.36□□□□□ -0.43
SMC1P32908 PCM1YEL058W 1674 nt12.35□□□□□ -0.43
SMC1P32908 BOP3YNL042W 1191 nt12.34□□□□□ -0.43
SMC1P32908 NCP1YHR042W 2076 nt12.33□□□□□ -0.44
SMC1P32908 SOR2YDL246C 1074 nt12.33□□□□□ -0.44
SMC1P32908 SOR1YJR159W 1074 nt12.33□□□□□ -0.44
SMC1P32908 ADH2YMR303C 1047 nt12.32□□□□□ -0.44
SMC1P32908 FRD1YEL047C 1413 nt12.3□□□□□ -0.44
SMC1P32908 CWP1YKL096W 720 nt12.3□□□□□ -0.44
SMC1P32908 YGR139WYGR139W 339 nt12.29□□□□□ -0.44
SMC1P32908 LCB1YMR296C 1677 nt12.28□□□□□ -0.44
SMC1P32908 YCL042WYCL042W 360 nt12.27□□□□□ -0.45
SMC1P32908 NVJ2YPR091C 2313 nt12.25□□□□□ -0.45
SMC1P32908 SNF6YHL025W 999 nt12.23□□□□□ -0.45
SMC1P32908 PTK1YKL198C 1989 nt12.21□□□□□ -0.45
SMC1P32908 SIM1YIL123W 1431 nt12.2□□□□□ -0.46
SMC1P32908 SPP1YPL138C 1062 nt12.19□□□□□ -0.46
SMC1P32908 BIO4YNR057C 714 nt12.15□□□□□ -0.46
SMC1P32908 YIH1YCR059C 777 nt12.13□□□□□ -0.47
SMC1P32908 RNQ1YCL028W 1218 nt12.1□□□□□ -0.47
SMC1P32908 LYS4YDR234W 2082 nt12.05□□□□□ -0.48
SMC1P32908 YLL053CYLL053C 459 nt12.03□□□□□ -0.48
SMC1P32908 DIC1YLR348C 897 nt12.01□□□□□ -0.49
SMC1P32908 PTH1YHR189W 573 nt12□□□□□ -0.49
SMC1P32908 YLR235CYLR235C 399 nt11.97□□□□□ -0.49
SMC1P32908 ERF2YLR246W 1080 nt11.97□□□□□ -0.49
SMC1P32908 YFL054CYFL054C 1941 nt11.96□□□□□ -0.5
SMC1P32908 FTR1YER145C 1215 nt11.95□□□□□ -0.5
SMC1P32908 CRR1YLR213C 1269 nt11.94□□□□□ -0.5
SMC1P32908 ATF2YGR177C 1608 nt11.92□□□□□ -0.5
SMC1P32908 RTG1YOL067C 534 nt11.9□□□□□ -0.5
SMC1P32908 GAL1YBR020W 1587 nt11.89□□□□□ -0.51
SMC1P32908 TIM23YNR017W 669 nt11.88□□□□□ -0.51
SMC1P32908 TRM5YHR070W 1500 nt11.87□□□□□ -0.51
SMC1P32908 YKL030WYKL030W 606 nt11.87□□□□□ -0.51
SMC1P32908 SPT8YLR055C 1809 nt11.86□□□□□ -0.51
SMC1P32908 YFL067WYFL067W 528 nt11.85□□□□□ -0.51
SMC1P32908 YLR179CYLR179C 606 nt11.82□□□□□ -0.52
SMC1P32908 HEM12YDR047W 1089 nt11.81□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms