Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.32■■□□□ 1.8
GDF1P27539 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GDF1P27539 DYNLL1-208ENST00000550178 581 ntBASIC26.32■■□□□ 1.8
GDF1P27539 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
GDF1P27539 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.29■■□□□ 1.8
GDF1P27539 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GDF1P27539 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
GDF1P27539 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.25■■□□□ 1.79
GDF1P27539 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
GDF1P27539 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.21■■□□□ 1.79
GDF1P27539 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
GDF1P27539 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
GDF1P27539 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
GDF1P27539 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
GDF1P27539 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
GDF1P27539 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
GDF1P27539 AC145285.7-201ENST00000614819 1539 ntBASIC26.15■■□□□ 1.78
GDF1P27539 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.14■■□□□ 1.77
GDF1P27539 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
GDF1P27539 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
GDF1P27539 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.12■■□□□ 1.77
GDF1P27539 AL031258.1-201ENST00000623562 325 ntBASIC26.1■■□□□ 1.77
GDF1P27539 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
GDF1P27539 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
GDF1P27539 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
GDF1P27539 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
GDF1P27539 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
GDF1P27539 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
GDF1P27539 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
GDF1P27539 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.01■■□□□ 1.75
GDF1P27539 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26■■□□□ 1.75
GDF1P27539 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
GDF1P27539 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
GDF1P27539 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
GDF1P27539 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
GDF1P27539 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
GDF1P27539 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
GDF1P27539 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
GDF1P27539 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.94■■□□□ 1.74
GDF1P27539 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.92■■□□□ 1.74
GDF1P27539 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.92■■□□□ 1.74
GDF1P27539 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
GDF1P27539 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.91■■□□□ 1.74
GDF1P27539 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.9■■□□□ 1.74
GDF1P27539 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
GDF1P27539 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.85■■□□□ 1.73
GDF1P27539 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
GDF1P27539 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.82■■□□□ 1.72
GDF1P27539 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
GDF1P27539 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
GDF1P27539 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.77■■□□□ 1.72
GDF1P27539 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.75■■□□□ 1.71
GDF1P27539 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.74■■□□□ 1.71
GDF1P27539 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
GDF1P27539 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
GDF1P27539 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
GDF1P27539 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
GDF1P27539 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
GDF1P27539 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
GDF1P27539 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
GDF1P27539 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.67■■□□□ 1.7
GDF1P27539 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GDF1P27539 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GDF1P27539 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.66■■□□□ 1.7
GDF1P27539 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
GDF1P27539 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.64■■□□□ 1.7
GDF1P27539 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.63■■□□□ 1.69
GDF1P27539 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GDF1P27539 RARRES2P7-201ENST00000567349 469 ntBASIC25.62■■□□□ 1.69
GDF1P27539 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GDF1P27539 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
GDF1P27539 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GDF1P27539 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
GDF1P27539 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
GDF1P27539 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.58■■□□□ 1.69
GDF1P27539 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.54■■□□□ 1.68
GDF1P27539 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
GDF1P27539 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.53■■□□□ 1.68
GDF1P27539 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.5■■□□□ 1.67
GDF1P27539 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.49■■□□□ 1.67
GDF1P27539 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
GDF1P27539 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
GDF1P27539 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
GDF1P27539 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.44■■□□□ 1.66
GDF1P27539 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
GDF1P27539 SETD8P1-201ENST00000623146 1180 ntBASIC25.42■■□□□ 1.66
GDF1P27539 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
GDF1P27539 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
GDF1P27539 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.4■■□□□ 1.66
GDF1P27539 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
GDF1P27539 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
GDF1P27539 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
GDF1P27539 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.37■■□□□ 1.65
GDF1P27539 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.35■■□□□ 1.65
GDF1P27539 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.34■■□□□ 1.65
GDF1P27539 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
GDF1P27539 AC097358.2-201ENST00000607541 1159 ntBASIC25.33■■□□□ 1.65
GDF1P27539 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.3■■□□□ 1.64
GDF1P27539 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
GDF1P27539 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms