Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
KCNA3P22001 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
KCNA3P22001 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
KCNA3P22001 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
KCNA3P22001 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC37.09■■■■□ 3.53
KCNA3P22001 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.09■■■■□ 3.53
KCNA3P22001 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC37.09■■■■□ 3.53
KCNA3P22001 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC37.07■■■■□ 3.52
KCNA3P22001 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC36.99■■■■□ 3.51
KCNA3P22001 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC36.95■■■■□ 3.51
KCNA3P22001 RARRES2P7-201ENST00000567349 469 ntBASIC36.93■■■■□ 3.5
KCNA3P22001 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36.92■■■■□ 3.5
KCNA3P22001 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC36.89■■■■□ 3.5
KCNA3P22001 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC36.83■■■■□ 3.49
KCNA3P22001 AC097358.2-201ENST00000607541 1159 ntBASIC36.77■■■■□ 3.48
KCNA3P22001 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
KCNA3P22001 AC136428.2-201ENST00000563187 214 ntBASIC36.73■■■■□ 3.47
KCNA3P22001 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC36.71■■■■□ 3.47
KCNA3P22001 RPS2P35-201ENST00000443417 897 ntBASIC36.67■■■■□ 3.46
KCNA3P22001 SUZ12P1-203ENST00000578195 985 ntBASIC36.67■■■■□ 3.46
KCNA3P22001 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
KCNA3P22001 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC36.62■■■■□ 3.45
KCNA3P22001 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
KCNA3P22001 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC36.61■■■■□ 3.45
KCNA3P22001 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC36.6■■■■□ 3.45
KCNA3P22001 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC36.59■■■■□ 3.45
KCNA3P22001 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
KCNA3P22001 SETD8P1-201ENST00000623146 1180 ntBASIC36.54■■■■□ 3.44
KCNA3P22001 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
KCNA3P22001 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
KCNA3P22001 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC36.51■■■■□ 3.44
KCNA3P22001 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC36.48■■■■□ 3.43
KCNA3P22001 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
KCNA3P22001 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC36.48■■■■□ 3.43
KCNA3P22001 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC36.46■■■■□ 3.43
KCNA3P22001 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC36.45■■■■□ 3.43
KCNA3P22001 EBPL-203ENST00000378270 579 ntTSL 2 BASIC36.43■■■■□ 3.42
KCNA3P22001 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC36.4■■■■□ 3.42
KCNA3P22001 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
KCNA3P22001 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC36.35■■■■□ 3.41
KCNA3P22001 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC36.34■■■■□ 3.41
KCNA3P22001 KLF16-203ENST00000592313 508 ntTSL 3 BASIC36.34■■■■□ 3.41
KCNA3P22001 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
KCNA3P22001 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC36.32■■■■□ 3.4
KCNA3P22001 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC36.31■■■■□ 3.4
KCNA3P22001 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
KCNA3P22001 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC36.28■■■■□ 3.4
KCNA3P22001 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
KCNA3P22001 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC36.24■■■■□ 3.39
KCNA3P22001 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC36.24■■■■□ 3.39
KCNA3P22001 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC36.22■■■■□ 3.39
KCNA3P22001 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
KCNA3P22001 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC36.15■■■■□ 3.38
KCNA3P22001 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
KCNA3P22001 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
KCNA3P22001 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC36.1■■■■□ 3.37
KCNA3P22001 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC36.08■■■■□ 3.37
KCNA3P22001 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC36.08■■■■□ 3.37
KCNA3P22001 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC36.07■■■■□ 3.36
KCNA3P22001 CAHM-201ENST00000604200 896 ntBASIC36.03■■■■□ 3.36
KCNA3P22001 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36■■■■□ 3.35
KCNA3P22001 AL162393.1-201ENST00000437852 946 ntBASIC35.99■■■■□ 3.35
KCNA3P22001 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC35.98■■■■□ 3.35
KCNA3P22001 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.34
KCNA3P22001 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
KCNA3P22001 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
KCNA3P22001 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC35.91■■■■□ 3.34
KCNA3P22001 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.89■■■■□ 3.34
KCNA3P22001 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
KCNA3P22001 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35.85■■■■□ 3.33
KCNA3P22001 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
KCNA3P22001 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
KCNA3P22001 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
KCNA3P22001 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.79■■■■□ 3.32
KCNA3P22001 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.79■■■■□ 3.32
KCNA3P22001 AP006261.1-201ENST00000584783 668 ntBASIC35.77■■■■□ 3.32
KCNA3P22001 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC35.76■■■■□ 3.32
KCNA3P22001 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.74■■■■□ 3.31
KCNA3P22001 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
KCNA3P22001 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
KCNA3P22001 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.72■■■■□ 3.31
KCNA3P22001 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC35.72■■■■□ 3.31
KCNA3P22001 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
KCNA3P22001 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
KCNA3P22001 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
KCNA3P22001 AL391121.1-201ENST00000607967 1349 ntBASIC35.69■■■■□ 3.3
KCNA3P22001 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC35.68■■■■□ 3.3
KCNA3P22001 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
KCNA3P22001 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
KCNA3P22001 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
KCNA3P22001 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
KCNA3P22001 AC145285.7-201ENST00000614819 1539 ntBASIC35.6■■■■□ 3.29
KCNA3P22001 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
KCNA3P22001 ABHD17AP4-201ENST00000411545 909 ntBASIC35.58■■■■□ 3.29
KCNA3P22001 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
KCNA3P22001 MIR7108-201ENST00000614319 87 ntBASIC35.57■■■■□ 3.28
KCNA3P22001 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC35.54■■■■□ 3.28
KCNA3P22001 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
KCNA3P22001 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.51■■■■□ 3.28
KCNA3P22001 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms