Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.49■■■□□ 2.47
RTN3O95197 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
RTN3O95197 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RTN3O95197 DYNLL1-208ENST00000550178 581 ntBASIC30.48■■■□□ 2.47
RTN3O95197 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RTN3O95197 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
RTN3O95197 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.45■■■□□ 2.47
RTN3O95197 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTN3O95197 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.42■■■□□ 2.46
RTN3O95197 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.42■■■□□ 2.46
RTN3O95197 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.4■■■□□ 2.46
RTN3O95197 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
RTN3O95197 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RTN3O95197 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RTN3O95197 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RTN3O95197 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
RTN3O95197 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
RTN3O95197 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
RTN3O95197 AC145285.7-201ENST00000614819 1539 ntBASIC30.29■■■□□ 2.44
RTN3O95197 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.27■■■□□ 2.44
RTN3O95197 AL031258.1-201ENST00000623562 325 ntBASIC30.26■■■□□ 2.43
RTN3O95197 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTN3O95197 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTN3O95197 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.23■■■□□ 2.43
RTN3O95197 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RTN3O95197 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
RTN3O95197 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RTN3O95197 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RTN3O95197 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RTN3O95197 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
RTN3O95197 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTN3O95197 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
RTN3O95197 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
RTN3O95197 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.13■■■□□ 2.41
RTN3O95197 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTN3O95197 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTN3O95197 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.1■■■□□ 2.41
RTN3O95197 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RTN3O95197 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RTN3O95197 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.06■■■□□ 2.4
RTN3O95197 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RTN3O95197 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.04■■■□□ 2.4
RTN3O95197 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.02■■■□□ 2.4
RTN3O95197 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.01■■■□□ 2.39
RTN3O95197 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
RTN3O95197 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.99■■■□□ 2.39
RTN3O95197 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.99■■■□□ 2.39
RTN3O95197 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RTN3O95197 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RTN3O95197 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.9■■■□□ 2.38
RTN3O95197 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.87■■■□□ 2.37
RTN3O95197 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.86■■■□□ 2.37
RTN3O95197 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
RTN3O95197 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.84■■■□□ 2.37
RTN3O95197 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RTN3O95197 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
RTN3O95197 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RTN3O95197 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RTN3O95197 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.78■■■□□ 2.36
RTN3O95197 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RTN3O95197 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RTN3O95197 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
RTN3O95197 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
RTN3O95197 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RTN3O95197 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RTN3O95197 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RTN3O95197 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RTN3O95197 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.69■■■□□ 2.34
RTN3O95197 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
RTN3O95197 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.66■■■□□ 2.34
RTN3O95197 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RTN3O95197 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.66■■■□□ 2.34
RTN3O95197 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.64■■■□□ 2.34
RTN3O95197 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RTN3O95197 RARRES2P7-201ENST00000567349 469 ntBASIC29.63■■■□□ 2.33
RTN3O95197 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.61■■■□□ 2.33
RTN3O95197 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
RTN3O95197 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RTN3O95197 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.58■■■□□ 2.33
RTN3O95197 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTN3O95197 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.52■■■□□ 2.32
RTN3O95197 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
RTN3O95197 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RTN3O95197 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RTN3O95197 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.49■■■□□ 2.31
RTN3O95197 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTN3O95197 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.48■■■□□ 2.31
RTN3O95197 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RTN3O95197 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.44■■■□□ 2.3
RTN3O95197 SETD8P1-201ENST00000623146 1180 ntBASIC29.42■■■□□ 2.3
RTN3O95197 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.38■■■□□ 2.29
RTN3O95197 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RTN3O95197 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
RTN3O95197 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.37■■■□□ 2.29
RTN3O95197 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
RTN3O95197 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RTN3O95197 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.35■■■□□ 2.29
RTN3O95197 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTN3O95197 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RTN3O95197 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms