Protein–RNA interactions for Protein: O60721

SLC24A1, Sodium/potassium/calcium exchanger 1, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A1O60721 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC40.46■■■■■ 4.07
SLC24A1O60721 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
SLC24A1O60721 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
SLC24A1O60721 DYNLL1-208ENST00000550178 581 ntBASIC40.43■■■■■ 4.06
SLC24A1O60721 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
SLC24A1O60721 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC40.41■■■■■ 4.06
SLC24A1O60721 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC40.4■■■■■ 4.06
SLC24A1O60721 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC40.4■■■■■ 4.06
SLC24A1O60721 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC40.39■■■■■ 4.06
SLC24A1O60721 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC40.38■■■■■ 4.05
SLC24A1O60721 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC40.38■■■■■ 4.05
SLC24A1O60721 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
SLC24A1O60721 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC40.32■■■■■ 4.05
SLC24A1O60721 AC145285.7-201ENST00000614819 1539 ntBASIC40.32■■■■■ 4.04
SLC24A1O60721 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC40.31■■■■■ 4.04
SLC24A1O60721 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC40.24■■■■■ 4.03
SLC24A1O60721 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC40.2■■■■■ 4.03
SLC24A1O60721 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC40.2■■■■■ 4.03
SLC24A1O60721 AL031258.1-201ENST00000623562 325 ntBASIC40.2■■■■■ 4.03
SLC24A1O60721 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
SLC24A1O60721 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC40.18■■■■■ 4.02
SLC24A1O60721 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
SLC24A1O60721 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC40.15■■■■■ 4.02
SLC24A1O60721 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC40.14■■■■■ 4.02
SLC24A1O60721 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
SLC24A1O60721 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC40.08■■■■■ 4.01
SLC24A1O60721 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC40.06■■■■■ 4
SLC24A1O60721 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
SLC24A1O60721 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC40.05■■■■■ 4
SLC24A1O60721 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC40.05■■■■■ 4
SLC24A1O60721 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC40.05■■■■■ 4
SLC24A1O60721 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
SLC24A1O60721 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC40.02■■■■■ 4
SLC24A1O60721 EBPL-203ENST00000378270 579 ntTSL 2 BASIC40■■■■□ 3.99
SLC24A1O60721 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
SLC24A1O60721 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
SLC24A1O60721 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
SLC24A1O60721 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC39.92■■■■□ 3.98
SLC24A1O60721 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.98
SLC24A1O60721 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
SLC24A1O60721 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC39.75■■■■□ 3.95
SLC24A1O60721 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC39.75■■■■□ 3.95
SLC24A1O60721 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
SLC24A1O60721 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC39.73■■■■□ 3.95
SLC24A1O60721 MVK-208ENST00000539696 608 ntTSL 5 BASIC39.73■■■■□ 3.95
SLC24A1O60721 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC39.69■■■■□ 3.94
SLC24A1O60721 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
SLC24A1O60721 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
SLC24A1O60721 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC39.64■■■■□ 3.94
SLC24A1O60721 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.94
SLC24A1O60721 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC39.63■■■■□ 3.93
SLC24A1O60721 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.61■■■■□ 3.93
SLC24A1O60721 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
SLC24A1O60721 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
SLC24A1O60721 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC39.56■■■■□ 3.92
SLC24A1O60721 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC39.54■■■■□ 3.92
SLC24A1O60721 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC39.52■■■■□ 3.92
SLC24A1O60721 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC39.52■■■■□ 3.92
SLC24A1O60721 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
SLC24A1O60721 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC39.5■■■■□ 3.91
SLC24A1O60721 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.48■■■■□ 3.91
SLC24A1O60721 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
SLC24A1O60721 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
SLC24A1O60721 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC39.45■■■■□ 3.91
SLC24A1O60721 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC39.44■■■■□ 3.9
SLC24A1O60721 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC39.4■■■■□ 3.9
SLC24A1O60721 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC39.39■■■■□ 3.9
SLC24A1O60721 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC39.39■■■■□ 3.9
SLC24A1O60721 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC39.37■■■■□ 3.89
SLC24A1O60721 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC39.36■■■■□ 3.89
SLC24A1O60721 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC39.34■■■■□ 3.89
SLC24A1O60721 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC39.32■■■■□ 3.89
SLC24A1O60721 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
SLC24A1O60721 KLF16-203ENST00000592313 508 ntTSL 3 BASIC39.28■■■■□ 3.88
SLC24A1O60721 RARRES2P7-201ENST00000567349 469 ntBASIC39.27■■■■□ 3.88
SLC24A1O60721 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
SLC24A1O60721 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
SLC24A1O60721 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC39.24■■■■□ 3.87
SLC24A1O60721 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC39.24■■■■□ 3.87
SLC24A1O60721 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC39.19■■■■□ 3.86
SLC24A1O60721 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC39.17■■■■□ 3.86
SLC24A1O60721 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
SLC24A1O60721 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC39.16■■■■□ 3.86
SLC24A1O60721 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
SLC24A1O60721 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
SLC24A1O60721 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC39.11■■■■□ 3.85
SLC24A1O60721 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC39.1■■■■□ 3.85
SLC24A1O60721 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC39.06■■■■□ 3.84
SLC24A1O60721 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
SLC24A1O60721 SETD8P1-201ENST00000623146 1180 ntBASIC39.01■■■■□ 3.84
SLC24A1O60721 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
SLC24A1O60721 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC38.95■■■■□ 3.83
SLC24A1O60721 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
SLC24A1O60721 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC38.94■■■■□ 3.82
SLC24A1O60721 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
SLC24A1O60721 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
SLC24A1O60721 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
SLC24A1O60721 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
SLC24A1O60721 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC38.88■■■■□ 3.81
SLC24A1O60721 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC38.88■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms