Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ABCD4O14678 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
ABCD4O14678 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
ABCD4O14678 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ABCD4O14678 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.23■■□□□ 1.63
ABCD4O14678 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ABCD4O14678 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
ABCD4O14678 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.21■■□□□ 1.63
ABCD4O14678 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ABCD4O14678 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ABCD4O14678 DYNLL1-208ENST00000550178 581 ntBASIC25.2■■□□□ 1.62
ABCD4O14678 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.17■■□□□ 1.62
ABCD4O14678 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ABCD4O14678 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
ABCD4O14678 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
ABCD4O14678 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCD4O14678 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ABCD4O14678 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ABCD4O14678 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
ABCD4O14678 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ABCD4O14678 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ABCD4O14678 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ABCD4O14678 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
ABCD4O14678 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ABCD4O14678 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ABCD4O14678 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.02■■□□□ 1.6
ABCD4O14678 AL031258.1-201ENST00000623562 325 ntBASIC25■■□□□ 1.59
ABCD4O14678 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCD4O14678 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCD4O14678 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
ABCD4O14678 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ABCD4O14678 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
ABCD4O14678 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCD4O14678 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
ABCD4O14678 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.93■■□□□ 1.58
ABCD4O14678 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.92■■□□□ 1.58
ABCD4O14678 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
ABCD4O14678 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.88■■□□□ 1.57
ABCD4O14678 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCD4O14678 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
ABCD4O14678 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ABCD4O14678 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.84■■□□□ 1.57
ABCD4O14678 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.84■■□□□ 1.57
ABCD4O14678 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ABCD4O14678 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.83■■□□□ 1.57
ABCD4O14678 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
ABCD4O14678 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ABCD4O14678 AC145285.7-201ENST00000614819 1539 ntBASIC24.8■■□□□ 1.56
ABCD4O14678 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ABCD4O14678 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
ABCD4O14678 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ABCD4O14678 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCD4O14678 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCD4O14678 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCD4O14678 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
ABCD4O14678 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.75■■□□□ 1.55
ABCD4O14678 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.73■■□□□ 1.55
ABCD4O14678 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.71■■□□□ 1.55
ABCD4O14678 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.71■■□□□ 1.55
ABCD4O14678 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ABCD4O14678 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.69■■□□□ 1.54
ABCD4O14678 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.69■■□□□ 1.54
ABCD4O14678 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCD4O14678 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCD4O14678 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCD4O14678 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
ABCD4O14678 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCD4O14678 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
ABCD4O14678 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.62■■□□□ 1.53
ABCD4O14678 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
ABCD4O14678 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
ABCD4O14678 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.61■■□□□ 1.53
ABCD4O14678 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.61■■□□□ 1.53
ABCD4O14678 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ABCD4O14678 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
ABCD4O14678 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ABCD4O14678 RARRES2P7-201ENST00000567349 469 ntBASIC24.57■■□□□ 1.52
ABCD4O14678 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ABCD4O14678 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCD4O14678 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCD4O14678 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.55■■□□□ 1.52
ABCD4O14678 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.54■■□□□ 1.52
ABCD4O14678 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ABCD4O14678 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCD4O14678 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ABCD4O14678 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.48■■□□□ 1.51
ABCD4O14678 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCD4O14678 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.45■■□□□ 1.5
ABCD4O14678 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCD4O14678 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ABCD4O14678 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.44■■□□□ 1.5
ABCD4O14678 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCD4O14678 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
ABCD4O14678 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
ABCD4O14678 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
ABCD4O14678 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
ABCD4O14678 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCD4O14678 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCD4O14678 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.39■■□□□ 1.5
ABCD4O14678 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms