Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 DYNLL1-208ENST00000550178 581 ntBASIC37.67■■■■□ 3.62
CHL1O00533 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
CHL1O00533 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC37.63■■■■□ 3.62
CHL1O00533 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC37.63■■■■□ 3.61
CHL1O00533 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC37.62■■■■□ 3.61
CHL1O00533 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
CHL1O00533 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC37.58■■■■□ 3.61
CHL1O00533 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC37.55■■■■□ 3.6
CHL1O00533 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
CHL1O00533 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC37.54■■■■□ 3.6
CHL1O00533 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC37.53■■■■□ 3.6
CHL1O00533 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC37.53■■■■□ 3.6
CHL1O00533 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
CHL1O00533 AC145285.7-201ENST00000614819 1539 ntBASIC37.51■■■■□ 3.6
CHL1O00533 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CHL1O00533 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC37.46■■■■□ 3.59
CHL1O00533 AL031258.1-201ENST00000623562 325 ntBASIC37.45■■■■□ 3.59
CHL1O00533 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC37.44■■■■□ 3.58
CHL1O00533 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC37.44■■■■□ 3.58
CHL1O00533 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CHL1O00533 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC37.43■■■■□ 3.58
CHL1O00533 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CHL1O00533 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.42■■■■□ 3.58
CHL1O00533 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
CHL1O00533 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.4■■■■□ 3.58
CHL1O00533 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC37.39■■■■□ 3.58
CHL1O00533 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
CHL1O00533 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.33■■■■□ 3.57
CHL1O00533 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CHL1O00533 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.32■■■■□ 3.56
CHL1O00533 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
CHL1O00533 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC37.29■■■■□ 3.56
CHL1O00533 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CHL1O00533 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC37.26■■■■□ 3.56
CHL1O00533 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC37.24■■■■□ 3.55
CHL1O00533 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC37.24■■■■□ 3.55
CHL1O00533 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
CHL1O00533 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC37.16■■■■□ 3.54
CHL1O00533 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
CHL1O00533 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC37.14■■■■□ 3.54
CHL1O00533 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.1■■■■□ 3.53
CHL1O00533 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
CHL1O00533 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC37.06■■■■□ 3.52
CHL1O00533 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC37.03■■■■□ 3.52
CHL1O00533 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
CHL1O00533 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.01■■■■□ 3.52
CHL1O00533 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC37.01■■■■□ 3.52
CHL1O00533 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
CHL1O00533 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC36.98■■■■□ 3.51
CHL1O00533 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC36.98■■■■□ 3.51
CHL1O00533 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
CHL1O00533 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.92■■■■□ 3.5
CHL1O00533 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
CHL1O00533 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
CHL1O00533 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC36.87■■■■□ 3.49
CHL1O00533 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CHL1O00533 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
CHL1O00533 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.8■■■■□ 3.48
CHL1O00533 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC36.8■■■■□ 3.48
CHL1O00533 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CHL1O00533 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CHL1O00533 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC36.74■■■■□ 3.47
CHL1O00533 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.73■■■■□ 3.47
CHL1O00533 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC36.73■■■■□ 3.47
CHL1O00533 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.73■■■■□ 3.47
CHL1O00533 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
CHL1O00533 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
CHL1O00533 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC36.67■■■■□ 3.46
CHL1O00533 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC36.65■■■■□ 3.46
CHL1O00533 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC36.62■■■■□ 3.45
CHL1O00533 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC36.56■■■■□ 3.44
CHL1O00533 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
CHL1O00533 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC36.54■■■■□ 3.44
CHL1O00533 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
CHL1O00533 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC36.51■■■■□ 3.44
CHL1O00533 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
CHL1O00533 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.51■■■■□ 3.44
CHL1O00533 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC36.5■■■■□ 3.43
CHL1O00533 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
CHL1O00533 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC36.47■■■■□ 3.43
CHL1O00533 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CHL1O00533 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC36.46■■■■□ 3.43
CHL1O00533 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CHL1O00533 KLF16-203ENST00000592313 508 ntTSL 3 BASIC36.45■■■■□ 3.43
CHL1O00533 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC36.45■■■■□ 3.43
CHL1O00533 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC36.43■■■■□ 3.42
CHL1O00533 RARRES2P7-201ENST00000567349 469 ntBASIC36.42■■■■□ 3.42
CHL1O00533 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
CHL1O00533 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC36.39■■■■□ 3.42
CHL1O00533 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHL1O00533 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CHL1O00533 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC36.37■■■■□ 3.41
CHL1O00533 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.35■■■■□ 3.41
CHL1O00533 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC36.34■■■■□ 3.41
CHL1O00533 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC36.34■■■■□ 3.41
CHL1O00533 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.31■■■■□ 3.4
CHL1O00533 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
CHL1O00533 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC36.27■■■■□ 3.4
CHL1O00533 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.24■■■■□ 3.39
CHL1O00533 SETD8P1-201ENST00000623146 1180 ntBASIC36.24■■■■□ 3.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms