Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.56■■□□□ 1.52
RNF223E7ERA6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
RNF223E7ERA6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.55■■□□□ 1.52
RNF223E7ERA6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF223E7ERA6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.53■■□□□ 1.52
RNF223E7ERA6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.5■■□□□ 1.51
RNF223E7ERA6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF223E7ERA6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF223E7ERA6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
RNF223E7ERA6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RNF223E7ERA6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF223E7ERA6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.47■■□□□ 1.51
RNF223E7ERA6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RNF223E7ERA6 RARRES2P7-201ENST00000567349 469 ntBASIC24.44■■□□□ 1.5
RNF223E7ERA6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF223E7ERA6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF223E7ERA6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF223E7ERA6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.39■■□□□ 1.49
RNF223E7ERA6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
RNF223E7ERA6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RNF223E7ERA6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF223E7ERA6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF223E7ERA6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF223E7ERA6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF223E7ERA6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF223E7ERA6 AC097358.2-201ENST00000607541 1159 ntBASIC24.24■■□□□ 1.47
RNF223E7ERA6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.23■■□□□ 1.47
RNF223E7ERA6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF223E7ERA6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.21■■□□□ 1.47
RNF223E7ERA6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF223E7ERA6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF223E7ERA6 SETD8P1-201ENST00000623146 1180 ntBASIC24.16■■□□□ 1.46
RNF223E7ERA6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RNF223E7ERA6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF223E7ERA6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF223E7ERA6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF223E7ERA6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RNF223E7ERA6 AC136428.2-201ENST00000563187 214 ntBASIC24.11■■□□□ 1.45
RNF223E7ERA6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.09■■□□□ 1.45
RNF223E7ERA6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RNF223E7ERA6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF223E7ERA6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.07■■□□□ 1.44
RNF223E7ERA6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF223E7ERA6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF223E7ERA6 SUZ12P1-203ENST00000578195 985 ntBASIC24.02■■□□□ 1.44
RNF223E7ERA6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF223E7ERA6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF223E7ERA6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RNF223E7ERA6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.01■■□□□ 1.43
RNF223E7ERA6 RPS2P35-201ENST00000443417 897 ntBASIC24.01■■□□□ 1.43
RNF223E7ERA6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF223E7ERA6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF223E7ERA6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF223E7ERA6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF223E7ERA6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF223E7ERA6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF223E7ERA6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF223E7ERA6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RNF223E7ERA6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
RNF223E7ERA6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.93■■□□□ 1.42
RNF223E7ERA6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF223E7ERA6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF223E7ERA6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF223E7ERA6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF223E7ERA6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF223E7ERA6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.87■■□□□ 1.41
RNF223E7ERA6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF223E7ERA6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF223E7ERA6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RNF223E7ERA6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF223E7ERA6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
RNF223E7ERA6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF223E7ERA6 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF223E7ERA6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF223E7ERA6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF223E7ERA6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF223E7ERA6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF223E7ERA6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF223E7ERA6 AC145285.7-201ENST00000614819 1539 ntBASIC23.7■■□□□ 1.38
RNF223E7ERA6 CAHM-201ENST00000604200 896 ntBASIC23.69■■□□□ 1.38
RNF223E7ERA6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF223E7ERA6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF223E7ERA6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF223E7ERA6 AL162393.1-201ENST00000437852 946 ntBASIC23.64■■□□□ 1.37
RNF223E7ERA6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF223E7ERA6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF223E7ERA6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RNF223E7ERA6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF223E7ERA6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF223E7ERA6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF223E7ERA6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF223E7ERA6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF223E7ERA6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF223E7ERA6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF223E7ERA6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF223E7ERA6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF223E7ERA6 AP006261.1-201ENST00000584783 668 ntBASIC23.58■■□□□ 1.37
RNF223E7ERA6 AL391121.1-201ENST00000607967 1349 ntBASIC23.58■■□□□ 1.36
RNF223E7ERA6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RNF223E7ERA6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms