Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM9A6NGZ8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM9A6NGZ8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMIM9A6NGZ8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.81■□□□□ 0.92
SMIM9A6NGZ8 AP002365.1-201ENST00000603448 772 ntBASIC20.81■□□□□ 0.92
SMIM9A6NGZ8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SMIM9A6NGZ8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM9A6NGZ8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM9A6NGZ8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM9A6NGZ8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM9A6NGZ8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SMIM9A6NGZ8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMIM9A6NGZ8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMIM9A6NGZ8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.76■□□□□ 0.91
SMIM9A6NGZ8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMIM9A6NGZ8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM9A6NGZ8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SMIM9A6NGZ8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM9A6NGZ8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.69■□□□□ 0.9
SMIM9A6NGZ8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM9A6NGZ8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SMIM9A6NGZ8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM9A6NGZ8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.66■□□□□ 0.9
SMIM9A6NGZ8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM9A6NGZ8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM9A6NGZ8 DYNLL1-208ENST00000550178 581 ntBASIC20.65■□□□□ 0.9
SMIM9A6NGZ8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM9A6NGZ8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.64■□□□□ 0.89
SMIM9A6NGZ8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.62■□□□□ 0.89
SMIM9A6NGZ8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SMIM9A6NGZ8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM9A6NGZ8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM9A6NGZ8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.58■□□□□ 0.89
SMIM9A6NGZ8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM9A6NGZ8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.58■□□□□ 0.88
SMIM9A6NGZ8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.56■□□□□ 0.88
SMIM9A6NGZ8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.55■□□□□ 0.88
SMIM9A6NGZ8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM9A6NGZ8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM9A6NGZ8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM9A6NGZ8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM9A6NGZ8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMIM9A6NGZ8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM9A6NGZ8 AL031258.1-201ENST00000623562 325 ntBASIC20.51■□□□□ 0.87
SMIM9A6NGZ8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM9A6NGZ8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.5■□□□□ 0.87
SMIM9A6NGZ8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.5■□□□□ 0.87
SMIM9A6NGZ8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMIM9A6NGZ8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM9A6NGZ8 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.48■□□□□ 0.87
SMIM9A6NGZ8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMIM9A6NGZ8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMIM9A6NGZ8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMIM9A6NGZ8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMIM9A6NGZ8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.4■□□□□ 0.86
SMIM9A6NGZ8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM9A6NGZ8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM9A6NGZ8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM9A6NGZ8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM9A6NGZ8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM9A6NGZ8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM9A6NGZ8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SMIM9A6NGZ8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM9A6NGZ8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM9A6NGZ8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.27■□□□□ 0.84
SMIM9A6NGZ8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM9A6NGZ8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM9A6NGZ8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM9A6NGZ8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM9A6NGZ8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.25■□□□□ 0.83
SMIM9A6NGZ8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.22■□□□□ 0.83
SMIM9A6NGZ8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMIM9A6NGZ8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SMIM9A6NGZ8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
SMIM9A6NGZ8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMIM9A6NGZ8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.19■□□□□ 0.82
SMIM9A6NGZ8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM9A6NGZ8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM9A6NGZ8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM9A6NGZ8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.15■□□□□ 0.82
SMIM9A6NGZ8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.14■□□□□ 0.81
SMIM9A6NGZ8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.13■□□□□ 0.81
SMIM9A6NGZ8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM9A6NGZ8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMIM9A6NGZ8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM9A6NGZ8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM9A6NGZ8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.11■□□□□ 0.81
SMIM9A6NGZ8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
SMIM9A6NGZ8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM9A6NGZ8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM9A6NGZ8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMIM9A6NGZ8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMIM9A6NGZ8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM9A6NGZ8 RARRES2P7-201ENST00000567349 469 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms