Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.79■■■□□ 2.84
TRIM43BA6NCK2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.79■■■□□ 2.84
TRIM43BA6NCK2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
TRIM43BA6NCK2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.74■■■□□ 2.83
TRIM43BA6NCK2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.74■■■□□ 2.83
TRIM43BA6NCK2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
TRIM43BA6NCK2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.71■■■□□ 2.83
TRIM43BA6NCK2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.7■■■□□ 2.83
TRIM43BA6NCK2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
TRIM43BA6NCK2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.67■■■□□ 2.82
TRIM43BA6NCK2 RARRES2P7-201ENST00000567349 469 ntBASIC32.63■■■□□ 2.81
TRIM43BA6NCK2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
TRIM43BA6NCK2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
TRIM43BA6NCK2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TRIM43BA6NCK2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
TRIM43BA6NCK2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM43BA6NCK2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.47■■■□□ 2.79
TRIM43BA6NCK2 AC097358.2-201ENST00000607541 1159 ntBASIC32.45■■■□□ 2.79
TRIM43BA6NCK2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRIM43BA6NCK2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
TRIM43BA6NCK2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.39■■■□□ 2.78
TRIM43BA6NCK2 AC136428.2-201ENST00000563187 214 ntBASIC32.36■■■□□ 2.77
TRIM43BA6NCK2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.34■■■□□ 2.77
TRIM43BA6NCK2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.33■■■□□ 2.77
TRIM43BA6NCK2 RPS2P35-201ENST00000443417 897 ntBASIC32.32■■■□□ 2.76
TRIM43BA6NCK2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TRIM43BA6NCK2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
TRIM43BA6NCK2 SUZ12P1-203ENST00000578195 985 ntBASIC32.29■■■□□ 2.76
TRIM43BA6NCK2 SETD8P1-201ENST00000623146 1180 ntBASIC32.27■■■□□ 2.76
TRIM43BA6NCK2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
TRIM43BA6NCK2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
TRIM43BA6NCK2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.24■■■□□ 2.75
TRIM43BA6NCK2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.24■■■□□ 2.75
TRIM43BA6NCK2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
TRIM43BA6NCK2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.16■■■□□ 2.74
TRIM43BA6NCK2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.15■■■□□ 2.74
TRIM43BA6NCK2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
TRIM43BA6NCK2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
TRIM43BA6NCK2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.14■■■□□ 2.74
TRIM43BA6NCK2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.11■■■□□ 2.73
TRIM43BA6NCK2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.11■■■□□ 2.73
TRIM43BA6NCK2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.1■■■□□ 2.73
TRIM43BA6NCK2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TRIM43BA6NCK2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.08■■■□□ 2.73
TRIM43BA6NCK2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
TRIM43BA6NCK2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
TRIM43BA6NCK2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TRIM43BA6NCK2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.03■■■□□ 2.72
TRIM43BA6NCK2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TRIM43BA6NCK2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
TRIM43BA6NCK2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.99■■■□□ 2.71
TRIM43BA6NCK2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.96■■■□□ 2.71
TRIM43BA6NCK2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM43BA6NCK2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
TRIM43BA6NCK2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM43BA6NCK2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.9■■■□□ 2.7
TRIM43BA6NCK2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.87■■■□□ 2.69
TRIM43BA6NCK2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.85■■■□□ 2.69
TRIM43BA6NCK2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM43BA6NCK2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM43BA6NCK2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM43BA6NCK2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.78■■■□□ 2.68
TRIM43BA6NCK2 CAHM-201ENST00000604200 896 ntBASIC31.75■■■□□ 2.67
TRIM43BA6NCK2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
TRIM43BA6NCK2 AL162393.1-201ENST00000437852 946 ntBASIC31.73■■■□□ 2.67
TRIM43BA6NCK2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
TRIM43BA6NCK2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TRIM43BA6NCK2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.7■■■□□ 2.67
TRIM43BA6NCK2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM43BA6NCK2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM43BA6NCK2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM43BA6NCK2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM43BA6NCK2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM43BA6NCK2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM43BA6NCK2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.58■■■□□ 2.65
TRIM43BA6NCK2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
TRIM43BA6NCK2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.57■■■□□ 2.64
TRIM43BA6NCK2 AP006261.1-201ENST00000584783 668 ntBASIC31.56■■■□□ 2.64
TRIM43BA6NCK2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
TRIM43BA6NCK2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TRIM43BA6NCK2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
TRIM43BA6NCK2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM43BA6NCK2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.52■■■□□ 2.64
TRIM43BA6NCK2 AL391121.1-201ENST00000607967 1349 ntBASIC31.5■■■□□ 2.63
TRIM43BA6NCK2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.5■■■□□ 2.63
TRIM43BA6NCK2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM43BA6NCK2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM43BA6NCK2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM43BA6NCK2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM43BA6NCK2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM43BA6NCK2 AC145285.7-201ENST00000614819 1539 ntBASIC31.47■■■□□ 2.63
TRIM43BA6NCK2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
TRIM43BA6NCK2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.46■■■□□ 2.63
TRIM43BA6NCK2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM43BA6NCK2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.45■■■□□ 2.62
TRIM43BA6NCK2 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.43■■■□□ 2.62
TRIM43BA6NCK2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM43BA6NCK2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
TRIM43BA6NCK2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM43BA6NCK2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms