Protein–RNA interactions for Protein: A0A0K0K1E9

TRBV7-7, T-cell receptor beta variable 7-7 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-7A0A0K0K1E9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV7-7A0A0K0K1E9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV7-7A0A0K0K1E9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRBV7-7A0A0K0K1E9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRBV7-7A0A0K0K1E9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV7-7A0A0K0K1E9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV7-7A0A0K0K1E9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV7-7A0A0K0K1E9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRBV7-7A0A0K0K1E9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV7-7A0A0K0K1E9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.33■□□□□ 0.53
TRBV7-7A0A0K0K1E9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV7-7A0A0K0K1E9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV7-7A0A0K0K1E9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV7-7A0A0K0K1E9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV7-7A0A0K0K1E9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV7-7A0A0K0K1E9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-7A0A0K0K1E9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-7A0A0K0K1E9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-7A0A0K0K1E9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV7-7A0A0K0K1E9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV7-7A0A0K0K1E9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV7-7A0A0K0K1E9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRBV7-7A0A0K0K1E9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV7-7A0A0K0K1E9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRBV7-7A0A0K0K1E9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV7-7A0A0K0K1E9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV7-7A0A0K0K1E9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV7-7A0A0K0K1E9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV7-7A0A0K0K1E9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV7-7A0A0K0K1E9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-7A0A0K0K1E9 AC135731.1-201ENST00000569415 2548 ntBASIC18.18■□□□□ 0.5
TRBV7-7A0A0K0K1E9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV7-7A0A0K0K1E9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV7-7A0A0K0K1E9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-7A0A0K0K1E9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-7A0A0K0K1E9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV7-7A0A0K0K1E9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV7-7A0A0K0K1E9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-7A0A0K0K1E9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV7-7A0A0K0K1E9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV7-7A0A0K0K1E9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRBV7-7A0A0K0K1E9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
TRBV7-7A0A0K0K1E9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV7-7A0A0K0K1E9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV7-7A0A0K0K1E9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV7-7A0A0K0K1E9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV7-7A0A0K0K1E9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV7-7A0A0K0K1E9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV7-7A0A0K0K1E9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV7-7A0A0K0K1E9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV7-7A0A0K0K1E9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV7-7A0A0K0K1E9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV7-7A0A0K0K1E9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV7-7A0A0K0K1E9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRBV7-7A0A0K0K1E9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV7-7A0A0K0K1E9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV7-7A0A0K0K1E9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV7-7A0A0K0K1E9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV7-7A0A0K0K1E9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV7-7A0A0K0K1E9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV7-7A0A0K0K1E9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV7-7A0A0K0K1E9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV7-7A0A0K0K1E9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV7-7A0A0K0K1E9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV7-7A0A0K0K1E9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRBV7-7A0A0K0K1E9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV7-7A0A0K0K1E9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRBV7-7A0A0K0K1E9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC17.94■□□□□ 0.46
TRBV7-7A0A0K0K1E9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV7-7A0A0K0K1E9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRBV7-7A0A0K0K1E9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV7-7A0A0K0K1E9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-7A0A0K0K1E9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV7-7A0A0K0K1E9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV7-7A0A0K0K1E9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV7-7A0A0K0K1E9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV7-7A0A0K0K1E9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV7-7A0A0K0K1E9 ABCB10P3-201ENST00000561950 2166 ntBASIC17.88■□□□□ 0.45
TRBV7-7A0A0K0K1E9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-7A0A0K0K1E9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV7-7A0A0K0K1E9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRBV7-7A0A0K0K1E9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRBV7-7A0A0K0K1E9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC17.84■□□□□ 0.45
TRBV7-7A0A0K0K1E9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-7A0A0K0K1E9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-7A0A0K0K1E9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-7A0A0K0K1E9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV7-7A0A0K0K1E9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-7A0A0K0K1E9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRBV7-7A0A0K0K1E9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-7A0A0K0K1E9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-7A0A0K0K1E9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-7A0A0K0K1E9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-7A0A0K0K1E9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRBV7-7A0A0K0K1E9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRBV7-7A0A0K0K1E9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-7A0A0K0K1E9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV7-7A0A0K0K1E9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-7A0A0K0K1E9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-7A0A0K0K1E9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms