Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.29■■□□□ 1
TRAV21A0A0B4J279 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
TRAV21A0A0B4J279 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRAV21A0A0B4J279 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV21A0A0B4J279 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRAV21A0A0B4J279 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV21A0A0B4J279 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRAV21A0A0B4J279 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAV21A0A0B4J279 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV21A0A0B4J279 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV21A0A0B4J279 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAV21A0A0B4J279 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV21A0A0B4J279 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAV21A0A0B4J279 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV21A0A0B4J279 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRAV21A0A0B4J279 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV21A0A0B4J279 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV21A0A0B4J279 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV21A0A0B4J279 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV21A0A0B4J279 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV21A0A0B4J279 AC015813.7-201ENST00000623294 581 ntBASIC21.1■□□□□ 0.97
TRAV21A0A0B4J279 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV21A0A0B4J279 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV21A0A0B4J279 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV21A0A0B4J279 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV21A0A0B4J279 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV21A0A0B4J279 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV21A0A0B4J279 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV21A0A0B4J279 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV21A0A0B4J279 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV21A0A0B4J279 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV21A0A0B4J279 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV21A0A0B4J279 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV21A0A0B4J279 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV21A0A0B4J279 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV21A0A0B4J279 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV21A0A0B4J279 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRAV21A0A0B4J279 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV21A0A0B4J279 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV21A0A0B4J279 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
TRAV21A0A0B4J279 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV21A0A0B4J279 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV21A0A0B4J279 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV21A0A0B4J279 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV21A0A0B4J279 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV21A0A0B4J279 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV21A0A0B4J279 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV21A0A0B4J279 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV21A0A0B4J279 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV21A0A0B4J279 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV21A0A0B4J279 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV21A0A0B4J279 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV21A0A0B4J279 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV21A0A0B4J279 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV21A0A0B4J279 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRAV21A0A0B4J279 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV21A0A0B4J279 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV21A0A0B4J279 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV21A0A0B4J279 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRAV21A0A0B4J279 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV21A0A0B4J279 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV21A0A0B4J279 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV21A0A0B4J279 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAV21A0A0B4J279 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
TRAV21A0A0B4J279 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV21A0A0B4J279 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV21A0A0B4J279 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV21A0A0B4J279 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRAV21A0A0B4J279 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV21A0A0B4J279 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV21A0A0B4J279 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV21A0A0B4J279 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV21A0A0B4J279 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAV21A0A0B4J279 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAV21A0A0B4J279 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV21A0A0B4J279 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.76■□□□□ 0.91
TRAV21A0A0B4J279 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV21A0A0B4J279 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV21A0A0B4J279 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV21A0A0B4J279 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV21A0A0B4J279 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV21A0A0B4J279 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV21A0A0B4J279 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV21A0A0B4J279 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV21A0A0B4J279 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV21A0A0B4J279 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV21A0A0B4J279 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV21A0A0B4J279 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV21A0A0B4J279 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TRAV21A0A0B4J279 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRAV21A0A0B4J279 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV21A0A0B4J279 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV21A0A0B4J279 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV21A0A0B4J279 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV21A0A0B4J279 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV21A0A0B4J279 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV21A0A0B4J279 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV21A0A0B4J279 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAV21A0A0B4J279 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRAV21A0A0B4J279 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms