Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 MRPL3P1-201ENST00000400109 1033 ntBASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 AC106795.1-205ENST00000512851 1056 ntBASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 PI4KAP1-204ENST00000612579 1703 ntBASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 AC005622.1-201ENST00000636801 1703 ntBASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGB1Q9Y5G3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 AC092127.1-201ENST00000567093 3455 ntBASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 FGD5P1-202ENST00000614866 2498 ntBASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 NUS1P2-201ENST00000417358 873 ntBASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 RBM17P3-201ENST00000417687 1192 ntBASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 PMS2P1-201ENST00000431037 1228 ntBASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 AL121912.1-201ENST00000603683 238 ntBASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHGB1Q9Y5G3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHGB1Q9Y5G3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms