Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB6Q9Y5F9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB6Q9Y5F9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB6Q9Y5F9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB6Q9Y5F9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB6Q9Y5F9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SNX33P1-201ENST00000592116 1762 ntBASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGB6Q9Y5F9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 FAM45BP-202ENST00000592932 1624 ntBASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 MIR943-201ENST00000401286 94 ntBASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 AC008677.1-201ENST00000519230 1561 ntBASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGB6Q9Y5F9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms