Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 ME2P1-201ENST00000426028 1970 ntBASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00474Q9P2X8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 UPF3AP3-201ENST00000420996 769 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CEND1P1-201ENST00000451006 455 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AP000344.2-201ENST00000512987 629 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AC092865.5-201ENST00000545435 363 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AL135744.1-201ENST00000565098 629 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AC055717.3-201ENST00000622967 595 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 TNRC18P2-201ENST00000417666 2714 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AC105917.1-201ENST00000506637 2539 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PAUPAR-201ENST00000630360 2965 ntBASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00474Q9P2X8 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00474Q9P2X8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms