Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRF2Q9HAW0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BRF2Q9HAW0 AC087481.3-201ENST00000602886 1894 ntBASIC15.29■□□□□ 0.04
BRF2Q9HAW0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BRF2Q9HAW0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BRF2Q9HAW0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
BRF2Q9HAW0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BRF2Q9HAW0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 AC018529.1-201ENST00000613063 361 ntBASIC15.28■□□□□ 0.04
BRF2Q9HAW0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 PPT1-215ENST00000641471 2368 ntBASIC15.28■□□□□ 0.04
BRF2Q9HAW0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRF2Q9HAW0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC090616.6-203ENST00000579186 1945 ntBASIC15.27■□□□□ 0.04
BRF2Q9HAW0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC004835.2-201ENST00000603762 682 ntBASIC15.27■□□□□ 0.04
BRF2Q9HAW0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.27■□□□□ 0.04
BRF2Q9HAW0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 AC136621.1-201ENST00000624017 2304 ntBASIC15.27■□□□□ 0.03
BRF2Q9HAW0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 AC073347.1-201ENST00000421633 2643 ntBASIC15.27■□□□□ 0.03
BRF2Q9HAW0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
BRF2Q9HAW0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRF2Q9HAW0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms