Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 AC011495.1-201ENST00000498085 584 ntBASIC17.17■□□□□ 0.34
NXF3Q9H4D5 AC104596.2-201ENST00000512793 793 ntBASIC17.17■□□□□ 0.34
NXF3Q9H4D5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 AC092552.1-201ENST00000547243 906 ntBASIC17.17■□□□□ 0.34
NXF3Q9H4D5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NXF3Q9H4D5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 TOMM22P5-201ENST00000416399 439 ntBASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 AC069224.1-201ENST00000566372 1715 ntBASIC17.16■□□□□ 0.34
NXF3Q9H4D5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.16■□□□□ 0.34
NXF3Q9H4D5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 LINC02199-201ENST00000506655 2702 ntBASIC17.15■□□□□ 0.34
NXF3Q9H4D5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 OR8S1-201ENST00000310194 1080 ntBASIC17.15■□□□□ 0.34
NXF3Q9H4D5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.15■□□□□ 0.34
NXF3Q9H4D5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms