Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SSBP3Q9BWW4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 TSSK5P-201ENST00000423978 907 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 FAM207CP-201ENST00000443486 507 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 TERF1P3-201ENST00000505638 1227 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 LINC02084-201ENST00000606069 1096 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.38□□□□□ -0.27
SSBP3Q9BWW4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 KRT8P12-202ENST00000472924 1397 ntBASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 UGT1A2P-201ENST00000454886 866 ntBASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 AC009118.2-201ENST00000613275 655 ntBASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms