Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.21□□□□□ -0.62
UPK3BQ9BT76 GGT3P-204ENST00000453783 1664 ntBASIC11.2□□□□□ -0.62
UPK3BQ9BT76 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC005915.1-201ENST00000624912 2018 ntBASIC11.2□□□□□ -0.62
UPK3BQ9BT76 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 MIR943-201ENST00000401286 94 ntBASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 BASP1P1-201ENST00000430708 665 ntBASIC11.2□□□□□ -0.62
UPK3BQ9BT76 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC007950.2-201ENST00000615045 2347 ntBASIC11.2□□□□□ -0.62
UPK3BQ9BT76 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms