Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 AC018712.1-201ENST00000455767 687 ntBASIC12.19□□□□□ -0.46
VGLL1Q99990 AP002469.2-201ENST00000531724 424 ntBASIC12.19□□□□□ -0.46
VGLL1Q99990 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.19□□□□□ -0.46
VGLL1Q99990 MIR4751-201ENST00000578027 74 ntBASIC12.19□□□□□ -0.46
VGLL1Q99990 AC117500.6-201ENST00000624871 588 ntBASIC12.19□□□□□ -0.46
VGLL1Q99990 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 AL645728.2-201ENST00000641974 660 ntBASIC12.19□□□□□ -0.46
VGLL1Q99990 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.19□□□□□ -0.46
VGLL1Q99990 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
VGLL1Q99990 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.19□□□□□ -0.46
VGLL1Q99990 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
VGLL1Q99990 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.19□□□□□ -0.46
VGLL1Q99990 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.18□□□□□ -0.46
VGLL1Q99990 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
VGLL1Q99990 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
VGLL1Q99990 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 RPS2P28-201ENST00000314255 741 ntBASIC12.18□□□□□ -0.46
VGLL1Q99990 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
VGLL1Q99990 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
VGLL1Q99990 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.18□□□□□ -0.46
VGLL1Q99990 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
VGLL1Q99990 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.18□□□□□ -0.46
VGLL1Q99990 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 AF186996.4-201ENST00000467186 377 ntBASIC12.18□□□□□ -0.46
VGLL1Q99990 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
VGLL1Q99990 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
VGLL1Q99990 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.18□□□□□ -0.46
VGLL1Q99990 AC148477.8-201ENST00000624298 468 ntBASIC12.18□□□□□ -0.46
VGLL1Q99990 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms