Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF2Q99805 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF2Q99805 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.93□□□□□ -0.02
TM9SF2Q99805 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF2Q99805 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF2Q99805 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF2Q99805 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 AL627223.1-201ENST00000416693 442 ntBASIC14.92□□□□□ -0.02
TM9SF2Q99805 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 HLA-J-203ENST00000494367 1087 ntBASIC14.92□□□□□ -0.02
TM9SF2Q99805 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 RFPL4AP1-201ENST00000530883 850 ntBASIC14.92□□□□□ -0.02
TM9SF2Q99805 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 AC021097.1-201ENST00000607902 574 ntBASIC14.92□□□□□ -0.02
TM9SF2Q99805 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF2Q99805 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF2Q99805 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 PRAL-201ENST00000624952 3286 ntBASIC14.91□□□□□ -0.02
TM9SF2Q99805 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 KRT8P23-201ENST00000560090 1207 ntBASIC14.91□□□□□ -0.02
TM9SF2Q99805 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 CYP2A7P1-201ENST00000595391 815 ntBASIC14.91□□□□□ -0.02
TM9SF2Q99805 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 AC009093.7-201ENST00000623853 1223 ntBASIC14.91□□□□□ -0.02
TM9SF2Q99805 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TM9SF2Q99805 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TM9SF2Q99805 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms