Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 DUSP5P1-201ENST00000441325 1139 ntBASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 MIR3909-201ENST00000579518 119 ntBASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NSMCE2Q96MF7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AP001282.1-201ENST00000531301 1499 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 CICP23-201ENST00000605013 2741 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 PMS2P4-201ENST00000412466 1052 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AC136632.2-201ENST00000512891 861 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AP002469.2-201ENST00000531724 424 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AC008667.4-201ENST00000607370 168 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AC107918.4-202ENST00000641623 219 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AC023908.3-201ENST00000564211 3047 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 SNX18-202ENST00000343017 3140 ntBASIC15.15■□□□□ 0.02
NSMCE2Q96MF7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 AC021087.4-201ENST00000563761 564 ntBASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.14■□□□□ 0.01
NSMCE2Q96MF7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms