Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
SHC3Q92529 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.01■□□□□ 0.31
SHC3Q92529 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.01■□□□□ 0.31
SHC3Q92529 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SHC3Q92529 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.01■□□□□ 0.31
SHC3Q92529 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.01■□□□□ 0.31
SHC3Q92529 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SHC3Q92529 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.01■□□□□ 0.31
SHC3Q92529 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17■□□□□ 0.31
SHC3Q92529 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHC3Q92529 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SHC3Q92529 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SHC3Q92529 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17■□□□□ 0.31
SHC3Q92529 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17■□□□□ 0.31
SHC3Q92529 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17■□□□□ 0.31
SHC3Q92529 MTND6P24-201ENST00000440466 518 ntBASIC17■□□□□ 0.31
SHC3Q92529 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17■□□□□ 0.31
SHC3Q92529 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SHC3Q92529 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 AL079307.3-201ENST00000556114 283 ntBASIC17■□□□□ 0.31
SHC3Q92529 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17■□□□□ 0.31
SHC3Q92529 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHC3Q92529 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17■□□□□ 0.31
SHC3Q92529 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SHC3Q92529 AC127383.1-201ENST00000444697 1800 ntBASIC17■□□□□ 0.31
SHC3Q92529 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHC3Q92529 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHC3Q92529 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17■□□□□ 0.31
SHC3Q92529 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHC3Q92529 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 AC087481.3-201ENST00000602886 1894 ntBASIC16.99■□□□□ 0.31
SHC3Q92529 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.99■□□□□ 0.31
SHC3Q92529 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHC3Q92529 AL607033.1-201ENST00000623900 1599 ntBASIC16.99■□□□□ 0.31
SHC3Q92529 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.99■□□□□ 0.31
SHC3Q92529 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SHC3Q92529 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SHC3Q92529 AL080243.2-201ENST00000418783 582 ntBASIC16.99■□□□□ 0.31
SHC3Q92529 TSEN15P1-201ENST00000423257 515 ntBASIC16.99■□□□□ 0.31
SHC3Q92529 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.99■□□□□ 0.31
SHC3Q92529 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC3Q92529 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.99■□□□□ 0.31
SHC3Q92529 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.99■□□□□ 0.31
SHC3Q92529 AL691403.2-201ENST00000618460 490 ntBASIC16.99■□□□□ 0.31
SHC3Q92529 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC3Q92529 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms