Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDND2Q8NHS1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 TSSK5P-201ENST00000423978 907 ntBASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 HLA-V-204ENST00000476601 1289 ntBASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 AC020765.3-201ENST00000613051 740 ntBASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDND2Q8NHS1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLDND2Q8NHS1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLDND2Q8NHS1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 CETN4P-206ENST00000642099 2168 ntBASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 MRPS18AP1-201ENST00000414458 589 ntBASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AC015922.1-201ENST00000421102 1152 ntBASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AC105021.1-202ENST00000570572 669 ntBASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 RN7SL828P-201ENST00000607615 303 ntBASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AL589739.1-201ENST00000607720 493 ntBASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLDND2Q8NHS1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms