Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 LINC00554-201ENST00000564841 3011 ntBASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 UPF3AP3-201ENST00000420996 769 ntBASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AC005237.2-201ENST00000434368 219 ntBASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 AP3S2-216ENST00000617003 1561 ntBASIC12.69□□□□□ -0.38
TTC9CQ8N5M4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AC004987.2-201ENST00000395959 1148 ntBASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AP000344.2-201ENST00000512987 629 ntBASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AC010327.4-202ENST00000591484 748 ntBASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AC026979.3-201ENST00000607315 403 ntBASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TTC9CQ8N5M4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms