Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AC009336.1-201ENST00000608941 1553 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AP000347.1-202ENST00000435868 847 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 KRT18P58-201ENST00000527480 1120 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AC139887.3-201ENST00000568585 713 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AL139011.1-202ENST00000642063 584 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 ZNF259P1-201ENST00000407656 1365 ntBASIC14.06□□□□□ -0.16
C11orf88Q6PI97 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.06□□□□□ -0.16
C11orf88Q6PI97 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 RNA5SP419-201ENST00000515908 135 ntBASIC14.05□□□□□ -0.16
C11orf88Q6PI97 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AL049757.1-201ENST00000616842 1596 ntBASIC14.05□□□□□ -0.16
C11orf88Q6PI97 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C11orf88Q6PI97 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C11orf88Q6PI97 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms