Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 HLA-V-204ENST00000476601 1289 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 DUX4L27-201ENST00000554796 1261 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 AC073592.8-201ENST00000624126 511 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 AC092384.3-202ENST00000564646 2873 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
TTC39BQ5VTQ0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 AC055876.3-201ENST00000431496 288 ntBASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 AL139010.1-201ENST00000454878 894 ntBASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 RN7SL828P-201ENST00000607615 303 ntBASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 AC138649.4-201ENST00000612222 287 ntBASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 CETN4P-206ENST00000642099 2168 ntBASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TTC39BQ5VTQ0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 FO538757.1-201ENST00000623083 1397 ntBASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 TREML5P-201ENST00000421694 576 ntBASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 RNA5SP421-201ENST00000516864 134 ntBASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 BANF1P1-201ENST00000553684 263 ntBASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TTC39BQ5VTQ0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms