Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 SLED1-202ENST00000512051 380 ntBASIC20.7■□□□□ 0.9
CCDC27Q2M243 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 LINC01115-203ENST00000606068 577 ntBASIC20.7■□□□□ 0.9
CCDC27Q2M243 AC008738.7-201ENST00000609744 511 ntBASIC20.7■□□□□ 0.9
CCDC27Q2M243 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC27Q2M243 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC27Q2M243 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC27Q2M243 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC27Q2M243 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 AC004840.1-201ENST00000636359 365 ntBASIC20.69■□□□□ 0.9
CCDC27Q2M243 CICP13-201ENST00000422015 2789 ntBASIC20.69■□□□□ 0.9
CCDC27Q2M243 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC27Q2M243 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC27Q2M243 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 AC015922.1-201ENST00000421102 1152 ntBASIC20.68■□□□□ 0.9
CCDC27Q2M243 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 KRT18P64-201ENST00000434946 1219 ntBASIC20.68■□□□□ 0.9
CCDC27Q2M243 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 AC127383.1-201ENST00000444697 1800 ntBASIC20.68■□□□□ 0.9
CCDC27Q2M243 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC27Q2M243 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC27Q2M243 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 AC090616.6-203ENST00000579186 1945 ntBASIC20.67■□□□□ 0.9
CCDC27Q2M243 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 AC004461.2-201ENST00000629517 803 ntBASIC20.67■□□□□ 0.9
CCDC27Q2M243 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC27Q2M243 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC27Q2M243 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms