Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 AL596276.2-201ENST00000447525 331 ntBASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 TUBB8P12-201ENST00000308911 1335 ntBASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 TUBB7P-202ENST00000428444 1305 ntBASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 TUBB8P7-204ENST00000567960 1332 ntBASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RSPO4Q2I0M5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 SNX33P1-201ENST00000592116 1762 ntBASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AC007274.2-201ENST00000421675 662 ntBASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AL008707.1-201ENST00000422498 534 ntBASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 RN7SL574P-201ENST00000581512 297 ntBASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AC007663.3-201ENST00000609632 465 ntBASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RSPO4Q2I0M5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RSPO4Q2I0M5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 AC133963.1-201ENST00000504166 1679 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 MIR1227-201ENST00000408484 88 ntBASIC15.33■□□□□ 0.04
RSPO4Q2I0M5 TOMM22P5-201ENST00000416399 439 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms