Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PRAMEP78395 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEP78395 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEP78395 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEP78395 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEP78395 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 FOXO1B-201ENST00000504678 1527 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PRAMEP78395 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 ELL2P1-201ENST00000413990 1906 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
PRAMEP78395 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 AL365209.1-201ENST00000624418 6473 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEP78395 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 AC142381.1-201ENST00000426099 345 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 CEND1P1-201ENST00000451006 455 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEP78395 KRT8P23-201ENST00000560090 1207 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 AP000842.3-202ENST00000569238 1080 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 UXT-AS1-201ENST00000590504 1525 ntBASIC16.19■□□□□ 0.18
PRAMEP78395 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEP78395 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEP78395 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEP78395 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEP78395 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PRAMEP78395 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEP78395 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEP78395 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 AP001282.1-201ENST00000531301 1499 ntBASIC16.18■□□□□ 0.18
PRAMEP78395 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 GPX1P2-201ENST00000429271 606 ntBASIC16.18■□□□□ 0.18
PRAMEP78395 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.18■□□□□ 0.18
PRAMEP78395 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEP78395 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.18■□□□□ 0.18
PRAMEP78395 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.18■□□□□ 0.18
PRAMEP78395 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.18■□□□□ 0.18
PRAMEP78395 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRAMEP78395 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRAMEP78395 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.18■□□□□ 0.18
PRAMEP78395 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms