Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ATXN3P54252 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ATXN3P54252 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.42■□□□□ 0.22
ATXN3P54252 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.42■□□□□ 0.22
ATXN3P54252 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.42■□□□□ 0.22
ATXN3P54252 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 KRT18P34-201ENST00000488218 1270 ntBASIC16.42■□□□□ 0.22
ATXN3P54252 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.42■□□□□ 0.22
ATXN3P54252 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.42■□□□□ 0.22
ATXN3P54252 AC007967.4-201ENST00000614700 386 ntBASIC16.42■□□□□ 0.22
ATXN3P54252 AL138828.2-201ENST00000615812 383 ntBASIC16.42■□□□□ 0.22
ATXN3P54252 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.42■□□□□ 0.22
ATXN3P54252 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.42■□□□□ 0.22
ATXN3P54252 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATXN3P54252 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
ATXN3P54252 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATXN3P54252 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
ATXN3P54252 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATXN3P54252 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 AC022188.1-201ENST00000620960 1664 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATXN3P54252 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 TSSK5P-201ENST00000423978 907 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 AL353705.2-201ENST00000428243 662 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.41■□□□□ 0.22
ATXN3P54252 SPTLC1P1-201ENST00000447199 261 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATXN3P54252 HLA-V-204ENST00000476601 1289 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 IGHV3-71-201ENST00000523324 359 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.41■□□□□ 0.22
ATXN3P54252 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.41■□□□□ 0.22
ATXN3P54252 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.41■□□□□ 0.22
ATXN3P54252 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.41■□□□□ 0.22
ATXN3P54252 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 AC126755.1-201ENST00000525846 6405 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 AP3S2-216ENST00000617003 1561 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.41■□□□□ 0.22
ATXN3P54252 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATXN3P54252 AC007541.1-201ENST00000570282 1469 ntBASIC16.41■□□□□ 0.22
ATXN3P54252 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATXN3P54252 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.4■□□□□ 0.22
ATXN3P54252 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.4■□□□□ 0.22
ATXN3P54252 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.4■□□□□ 0.22
ATXN3P54252 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATXN3P54252 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ARSEP1-201ENST00000420443 635 ntBASIC16.4■□□□□ 0.22
ATXN3P54252 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.4■□□□□ 0.22
ATXN3P54252 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.4■□□□□ 0.22
ATXN3P54252 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.4■□□□□ 0.22
ATXN3P54252 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.4■□□□□ 0.22
ATXN3P54252 AL138918.1-201ENST00000568306 659 ntBASIC16.4■□□□□ 0.22
ATXN3P54252 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.4■□□□□ 0.22
ATXN3P54252 AC021097.1-201ENST00000607902 574 ntBASIC16.4■□□□□ 0.22
ATXN3P54252 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.4■□□□□ 0.22
ATXN3P54252 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATXN3P54252 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms