Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL136317.3-201ENST00000618497 906 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 AP001059.3-201ENST00000619053 235 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LIMK2P53671 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK2P53671 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
LIMK2P53671 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.15■□□□□ 0.18
LIMK2P53671 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LIMK2P53671 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.15■□□□□ 0.18
LIMK2P53671 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LIMK2P53671 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LIMK2P53671 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 DBET-201ENST00000630918 3363 ntBASIC16.14■□□□□ 0.17
LIMK2P53671 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.14■□□□□ 0.17
LIMK2P53671 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LIMK2P53671 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LIMK2P53671 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 GPS2P2-201ENST00000430745 888 ntBASIC16.14■□□□□ 0.17
LIMK2P53671 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.14■□□□□ 0.17
LIMK2P53671 BCRP1-201ENST00000444246 691 ntBASIC16.14■□□□□ 0.17
LIMK2P53671 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.14■□□□□ 0.17
LIMK2P53671 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.14■□□□□ 0.17
LIMK2P53671 AC005498.2-205ENST00000593218 784 ntBASIC16.14■□□□□ 0.17
LIMK2P53671 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LIMK2P53671 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 AC092850.2-201ENST00000623821 2697 ntBASIC16.14■□□□□ 0.17
LIMK2P53671 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 AP001282.1-201ENST00000531301 1499 ntBASIC16.14■□□□□ 0.17
LIMK2P53671 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LIMK2P53671 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LIMK2P53671 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LIMK2P53671 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LIMK2P53671 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.13■□□□□ 0.17
LIMK2P53671 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.13■□□□□ 0.17
LIMK2P53671 RBPMS2P1-201ENST00000437762 623 ntBASIC16.13■□□□□ 0.17
LIMK2P53671 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.13■□□□□ 0.17
LIMK2P53671 AC069262.1-201ENST00000539058 672 ntBASIC16.13■□□□□ 0.17
LIMK2P53671 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.13■□□□□ 0.17
LIMK2P53671 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LIMK2P53671 AC084121.4-201ENST00000641598 221 ntBASIC16.13■□□□□ 0.17
LIMK2P53671 AF228730.8-201ENST00000642140 221 ntBASIC16.13■□□□□ 0.17
LIMK2P53671 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.13■□□□□ 0.17
LIMK2P53671 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.13■□□□□ 0.17
LIMK2P53671 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LIMK2P53671 AC136621.1-201ENST00000624017 2304 ntBASIC16.13■□□□□ 0.17
LIMK2P53671 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.13■□□□□ 0.17
LIMK2P53671 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LIMK2P53671 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms