Protein–RNA interactions for Protein: P36544

CHRNA7, Neuronal acetylcholine receptor subunit alpha-7, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7P36544 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CHRNA7P36544 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 TNRC18P2-201ENST00000417666 2714 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 RHOQP3-201ENST00000437982 621 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 AC040169.1-201ENST00000565382 521 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 AL031432.2-201ENST00000566714 459 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 AL928711.1-201ENST00000570165 459 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 MIR4515-201ENST00000584082 81 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 OR2I1P-209ENST00000641730 5365 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 PCDHA3-202ENST00000532566 4594 ntBASIC13.18□□□□□ -0.3
CHRNA7P36544 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.18□□□□□ -0.3
CHRNA7P36544 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.18□□□□□ -0.3
CHRNA7P36544 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHRNA7P36544 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRNA7P36544 PMS2P7-201ENST00000506558 1336 ntBASIC13.17□□□□□ -0.3
CHRNA7P36544 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHRNA7P36544 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHRNA7P36544 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRNA7P36544 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.17□□□□□ -0.3
CHRNA7P36544 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CHRNA7P36544 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 MIR648-201ENST00000385046 94 ntBASIC13.17□□□□□ -0.3
CHRNA7P36544 AC023274.1-201ENST00000418278 595 ntBASIC13.17□□□□□ -0.3
CHRNA7P36544 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.17□□□□□ -0.3
CHRNA7P36544 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 KRT19P2-202ENST00000557173 1012 ntBASIC13.17□□□□□ -0.3
CHRNA7P36544 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHRNA7P36544 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.17□□□□□ -0.3
CHRNA7P36544 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHRNA7P36544 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CHRNA7P36544 REXO1L8P-201ENST00000604378 1897 ntBASIC13.16□□□□□ -0.3
CHRNA7P36544 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 AL603832.2-201ENST00000566195 2125 ntBASIC13.16□□□□□ -0.3
CHRNA7P36544 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRNA7P36544 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.16□□□□□ -0.3
CHRNA7P36544 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHRNA7P36544 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms