Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.51□□□□□ -0.25
COL8A2P25067 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.51□□□□□ -0.25
COL8A2P25067 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.51□□□□□ -0.25
COL8A2P25067 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
COL8A2P25067 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
COL8A2P25067 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.51□□□□□ -0.25
COL8A2P25067 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
COL8A2P25067 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 AC004987.2-201ENST00000395959 1148 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
COL8A2P25067 HIST3H2BA-201ENST00000436555 524 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 AC114501.2-201ENST00000439631 535 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.51□□□□□ -0.25
COL8A2P25067 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 DOC2GP-202ENST00000514950 1163 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.51□□□□□ -0.25
COL8A2P25067 SPDYE22P-201ENST00000582158 798 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 AC027307.3-201ENST00000594262 1100 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 AL132655.2-201ENST00000596276 594 ntBASIC13.51□□□□□ -0.25
COL8A2P25067 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
COL8A2P25067 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
COL8A2P25067 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
COL8A2P25067 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.51□□□□□ -0.25
COL8A2P25067 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
COL8A2P25067 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
COL8A2P25067 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 AL353779.1-201ENST00000434793 351 ntBASIC13.5□□□□□ -0.25
COL8A2P25067 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.5□□□□□ -0.25
COL8A2P25067 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 AC243562.2-201ENST00000561247 970 ntBASIC13.5□□□□□ -0.25
COL8A2P25067 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 AC004790.1-201ENST00000612686 536 ntBASIC13.5□□□□□ -0.25
COL8A2P25067 AC025048.6-201ENST00000634326 1161 ntBASIC13.5□□□□□ -0.25
COL8A2P25067 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.5□□□□□ -0.25
COL8A2P25067 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
COL8A2P25067 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
COL8A2P25067 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.5□□□□□ -0.25
COL8A2P25067 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
COL8A2P25067 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms