Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
THBS1P07996 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.74□□□□□ -0.05
THBS1P07996 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 AL136982.4-201ENST00000437689 1740 ntBASIC14.74□□□□□ -0.05
THBS1P07996 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
THBS1P07996 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 ELL2P1-201ENST00000413990 1906 ntBASIC14.74□□□□□ -0.05
THBS1P07996 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
THBS1P07996 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
THBS1P07996 CICP13-201ENST00000422015 2789 ntBASIC14.73□□□□□ -0.05
THBS1P07996 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 AP003680.1-201ENST00000598970 3660 ntBASIC14.73□□□□□ -0.05
THBS1P07996 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 CYP4F24P-201ENST00000586049 1580 ntBASIC14.73□□□□□ -0.05
THBS1P07996 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 AC092850.2-201ENST00000623821 2697 ntBASIC14.73□□□□□ -0.05
THBS1P07996 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 UXT-AS1-201ENST00000590504 1525 ntBASIC14.73□□□□□ -0.05
THBS1P07996 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.73□□□□□ -0.05
THBS1P07996 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.73□□□□□ -0.05
THBS1P07996 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
THBS1P07996 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.73□□□□□ -0.05
THBS1P07996 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.73□□□□□ -0.05
THBS1P07996 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.73□□□□□ -0.05
THBS1P07996 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.73□□□□□ -0.05
THBS1P07996 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.73□□□□□ -0.05
THBS1P07996 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 SLC25A39P2-201ENST00000537614 270 ntBASIC14.73□□□□□ -0.05
THBS1P07996 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.73□□□□□ -0.05
THBS1P07996 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.73□□□□□ -0.05
THBS1P07996 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.73□□□□□ -0.05
THBS1P07996 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.73□□□□□ -0.05
THBS1P07996 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.73□□□□□ -0.05
THBS1P07996 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
THBS1P07996 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.73□□□□□ -0.05
THBS1P07996 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
THBS1P07996 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
THBS1P07996 PPT1-215ENST00000641471 2368 ntBASIC14.73□□□□□ -0.05
THBS1P07996 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
THBS1P07996 AP3S2-216ENST00000617003 1561 ntBASIC14.73□□□□□ -0.05
THBS1P07996 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.72□□□□□ -0.05
THBS1P07996 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 AC105250.1-201ENST00000509378 2057 ntBASIC14.72□□□□□ -0.05
THBS1P07996 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 AC073347.1-201ENST00000421633 2643 ntBASIC14.72□□□□□ -0.05
THBS1P07996 AC087481.3-201ENST00000602886 1894 ntBASIC14.72□□□□□ -0.05
THBS1P07996 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.72□□□□□ -0.05
THBS1P07996 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
THBS1P07996 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
THBS1P07996 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms