Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-CO1P00395 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-CO1P00395 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-CO1P00395 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-CO1P00395 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MT-CO1P00395 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.42■□□□□ 0.22
MT-CO1P00395 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.42■□□□□ 0.22
MT-CO1P00395 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.42■□□□□ 0.22
MT-CO1P00395 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.42■□□□□ 0.22
MT-CO1P00395 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.42■□□□□ 0.22
MT-CO1P00395 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.42■□□□□ 0.22
MT-CO1P00395 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
MT-CO1P00395 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MT-CO1P00395 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 AL513523.2-202ENST00000427283 2040 ntBASIC16.41■□□□□ 0.22
MT-CO1P00395 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.41■□□□□ 0.22
MT-CO1P00395 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MT-CO1P00395 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.41■□□□□ 0.22
MT-CO1P00395 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.41■□□□□ 0.22
MT-CO1P00395 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.41■□□□□ 0.22
MT-CO1P00395 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 MIR4745-201ENST00000577608 62 ntBASIC16.41■□□□□ 0.22
MT-CO1P00395 LINC02084-201ENST00000606069 1096 ntBASIC16.41■□□□□ 0.22
MT-CO1P00395 AL844908.2-201ENST00000609461 460 ntBASIC16.41■□□□□ 0.22
MT-CO1P00395 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.41■□□□□ 0.22
MT-CO1P00395 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-CO1P00395 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.41■□□□□ 0.22
MT-CO1P00395 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 KRT8P12-202ENST00000472924 1397 ntBASIC16.4■□□□□ 0.22
MT-CO1P00395 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-CO1P00395 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-CO1P00395 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
MT-CO1P00395 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-CO1P00395 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-CO1P00395 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms