Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.04■□□□□ 0.16
CBX6O95503 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.04■□□□□ 0.16
CBX6O95503 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 AL596442.2-201ENST00000610240 980 ntBASIC16.04■□□□□ 0.16
CBX6O95503 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CBX6O95503 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 MIR1199-201ENST00000621445 119 ntBASIC16.04■□□□□ 0.16
CBX6O95503 AC005593.1-201ENST00000624894 515 ntBASIC16.04■□□□□ 0.16
CBX6O95503 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.04■□□□□ 0.16
CBX6O95503 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CBX6O95503 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CBX6O95503 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 AC091951.1-201ENST00000512854 2465 ntBASIC16.04■□□□□ 0.16
CBX6O95503 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 AC067930.6-201ENST00000623257 4947 ntBASIC16.03■□□□□ 0.16
CBX6O95503 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CBX6O95503 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 KRT18P27-201ENST00000427733 1299 ntBASIC16.03■□□□□ 0.16
CBX6O95503 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 METTL21AP1-201ENST00000438852 635 ntBASIC16.03■□□□□ 0.16
CBX6O95503 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.03■□□□□ 0.16
CBX6O95503 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.03■□□□□ 0.16
CBX6O95503 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.03■□□□□ 0.16
CBX6O95503 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 AL022326.1-202ENST00000641533 845 ntBASIC16.03■□□□□ 0.16
CBX6O95503 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 AC079776.2-201ENST00000641154 1609 ntBASIC16.03■□□□□ 0.16
CBX6O95503 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX6O95503 AC004817.3-201ENST00000602957 2129 ntBASIC16.03■□□□□ 0.16
CBX6O95503 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX6O95503 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX6O95503 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX6O95503 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX6O95503 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX6O95503 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CBX6O95503 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CBX6O95503 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX6O95503 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX6O95503 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CBX6O95503 NFIC-211ENST00000641145 8399 ntBASIC16.02■□□□□ 0.16
CBX6O95503 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX6O95503 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CBX6O95503 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX6O95503 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CBX6O95503 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX6O95503 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX6O95503 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CBX6O95503 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms