Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MIR661-201ENST00000384842 89 ntBASIC15.33■□□□□ 0.04
PRICKLE3O43900 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 AC074338.1-201ENST00000416825 156 ntBASIC15.33■□□□□ 0.04
PRICKLE3O43900 TARDBPP1-201ENST00000442013 1203 ntBASIC15.33■□□□□ 0.04
PRICKLE3O43900 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRICKLE3O43900 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.33■□□□□ 0.04
PRICKLE3O43900 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 AL109936.8-201ENST00000641772 604 ntBASIC15.32■□□□□ 0.04
PRICKLE3O43900 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.32■□□□□ 0.04
PRICKLE3O43900 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRICKLE3O43900 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 LINC02199-201ENST00000506655 2702 ntBASIC15.31■□□□□ 0.04
PRICKLE3O43900 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.31■□□□□ 0.04
PRICKLE3O43900 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRICKLE3O43900 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms