Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 BRWD1P1-201ENST00000401091 371 ntBASIC19■□□□□ 0.63
HPS5Q9UPZ3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 AC055876.2-201ENST00000531834 546 ntBASIC19■□□□□ 0.63
HPS5Q9UPZ3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 AC022188.1-201ENST00000620960 1664 ntBASIC19■□□□□ 0.63
HPS5Q9UPZ3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
HPS5Q9UPZ3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
HPS5Q9UPZ3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 AL353705.2-201ENST00000428243 662 ntBASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 RNA5SP423-201ENST00000517127 109 ntBASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 AL365330.1-201ENST00000607459 531 ntBASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 MIR6727-201ENST00000620702 65 ntBASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPS5Q9UPZ3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 HCG11-201ENST00000411553 5696 ntBASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 ELK1P1-201ENST00000485699 580 ntBASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 RN7SL828P-201ENST00000607615 303 ntBASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 AC008894.3-201ENST00000624324 3103 ntBASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPS5Q9UPZ3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS5Q9UPZ3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.97■□□□□ 0.63
HPS5Q9UPZ3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
HPS5Q9UPZ3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS5Q9UPZ3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPS5Q9UPZ3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms