Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AL031731.1-201ENST00000642131 2094 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 GGT4P-201ENST00000623672 1708 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AC006449.6-201ENST00000612330 2296 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 SNX33P1-201ENST00000592116 1762 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 ATP5G2P1-201ENST00000433580 426 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 PAWRP1-201ENST00000451083 565 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AC064862.7-201ENST00000604520 867 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AL356585.2-201ENST00000625078 2396 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 KRT8P39-201ENST00000396270 1433 ntBASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
C12orf4Q9NQ89 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AL512652.2-201ENST00000625156 1716 ntBASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AC132008.2-207ENST00000454517 770 ntBASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AL731571.1-201ENST00000617058 5428 ntBASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C12orf4Q9NQ89 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
C12orf4Q9NQ89 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms