Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 AC131009.4-201ENST00000624048 1740 ntBASIC16.92■□□□□ 0.3
CD248Q9HCU0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.92■□□□□ 0.3
CD248Q9HCU0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CD248Q9HCU0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD248Q9HCU0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC006058.4-201ENST00000624016 1670 ntBASIC16.91■□□□□ 0.3
CD248Q9HCU0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.91■□□□□ 0.3
CD248Q9HCU0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 UGT1A2P-201ENST00000454886 866 ntBASIC16.91■□□□□ 0.3
CD248Q9HCU0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 ALG1L8P-201ENST00000533887 760 ntBASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 LINC00895-201ENST00000629028 1637 ntBASIC16.91■□□□□ 0.3
CD248Q9HCU0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 AC016027.1-202ENST00000607927 1699 ntBASIC16.91■□□□□ 0.3
CD248Q9HCU0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.91■□□□□ 0.3
CD248Q9HCU0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD248Q9HCU0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 FO538757.1-201ENST00000623083 1397 ntBASIC16.9■□□□□ 0.3
CD248Q9HCU0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AL359258.3-201ENST00000622910 2331 ntBASIC16.9■□□□□ 0.3
CD248Q9HCU0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AC125807.1-201ENST00000483097 614 ntBASIC16.9■□□□□ 0.3
CD248Q9HCU0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AL138918.1-201ENST00000568306 659 ntBASIC16.9■□□□□ 0.3
CD248Q9HCU0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AC027307.2-201ENST00000591252 911 ntBASIC16.9■□□□□ 0.3
CD248Q9HCU0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AC023908.3-201ENST00000564211 3047 ntBASIC16.9■□□□□ 0.3
CD248Q9HCU0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD248Q9HCU0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD248Q9HCU0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms