Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 FOXO1B-201ENST00000504678 1527 ntBASIC11.23□□□□□ -0.61
UPK3BQ9BT76 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 AC008677.1-201ENST00000519230 1561 ntBASIC11.23□□□□□ -0.61
UPK3BQ9BT76 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 AL603756.1-201ENST00000606511 2163 ntBASIC11.23□□□□□ -0.61
UPK3BQ9BT76 PCDHA14-201ENST00000506751 2298 ntBASIC11.23□□□□□ -0.61
UPK3BQ9BT76 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
UPK3BQ9BT76 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 RNA5SP421-201ENST00000516864 134 ntBASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AC069120.2-201ENST00000524091 540 ntBASIC11.22□□□□□ -0.61
UPK3BQ9BT76 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.22□□□□□ -0.61
UPK3BQ9BT76 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 AL161772.1-201ENST00000610494 4412 ntBASIC11.21□□□□□ -0.61
UPK3BQ9BT76 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 PCGF3-213ENST00000620529 1899 ntBASIC11.21□□□□□ -0.61
UPK3BQ9BT76 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.21□□□□□ -0.61
UPK3BQ9BT76 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms