Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 VN2R19P-201ENST00000442399 1052 ntBASIC14.67□□□□□ -0.06
SNX18Q96RF0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 AL359183.1-201ENST00000623796 2132 ntBASIC14.67□□□□□ -0.06
SNX18Q96RF0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 PPT1-215ENST00000641471 2368 ntBASIC14.67□□□□□ -0.06
SNX18Q96RF0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 AC068587.6-202ENST00000641839 5619 ntBASIC14.67□□□□□ -0.06
SNX18Q96RF0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 RNA5SP416-201ENST00000516838 111 ntBASIC14.66□□□□□ -0.06
SNX18Q96RF0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 AC139749.1-202ENST00000617529 3139 ntBASIC14.66□□□□□ -0.06
SNX18Q96RF0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.66□□□□□ -0.06
SNX18Q96RF0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNX18Q96RF0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNX18Q96RF0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.65□□□□□ -0.06
SNX18Q96RF0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms