Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM47Q96LD4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM47Q96LD4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM47Q96LD4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM47Q96LD4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 TMEM261P1-201ENST00000604899 340 ntBASIC18.69■□□□□ 0.58
TRIM47Q96LD4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 AL033527.5-201ENST00000641382 801 ntBASIC18.69■□□□□ 0.58
TRIM47Q96LD4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM47Q96LD4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM47Q96LD4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms