Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP1Q8TDR0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 AP001282.1-201ENST00000531301 1499 ntBASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 MIR574-201ENST00000385209 96 ntBASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 MCCD1P2-201ENST00000423228 335 ntBASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 IGHV3-62-201ENST00000520057 340 ntBASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP1Q8TDR0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 AC026120.1-201ENST00000611536 926 ntBASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.74■□□□□ 0.27
TRAF3IP1Q8TDR0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP1Q8TDR0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms